| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1664 |
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| Symbol | |
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| ID | 5670066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1988742 |
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| End bp | 1989836 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240582 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001506008 |
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| Protein GI | 158313500 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.825748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.49413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAC CGTCCGCGAC ACTCGGGCAC GACGACCGTG CCGGCGGGCC CGGGACACAC
CGGGTATGGG TCGAGCTCGG CGACCGCGGT TATCCCGTCG ACATCGGGCC CGGCGTCCGG
CGCACGCTGC CGGAGGTCGT CGCCCGGATC GACGCGTCCC GGGTCGTGAT CGTCTCGGCC
CGGCCAGAGG ACGACGCGGT ACCCGATCCC GGGGTCCCGG CGCTGCGCGT CGCCGCCCGC
GACGGCGAGC CGGACAAGAA CCTGGCCAAC GTCCAGGCGC TCTGCGAGCG GTTCGCGGCG
TTCGGCCTGA CTCGCACGGA CGCGGTGGTC TCCTGCGGCG GCGGGACGAC GACCGACGTC
GTCGGGCTCG CGGCGGCGCT CTACCACCGC GGTATCGCGG TTATCCACCT CCCGACGTCG
CTGCTGGCGC AGGTCGACGC GAGCGTCGGC GGCAAGACGG CGGTGAACCT GCCGGCCGGC
AAGAACCTGG TCGGCGCCTA CTGGCAGCCC AGCGCCGTGC TGTGCGACAC CGACTACCTG
GCGACGCTGC CCGCGCGCGA GTGGACCAAC GGCTACGGGG AGATCGCGCG GGCGCACTTC
ATCGGCGCCG GCGACCTGCG CGGACGTCCC GTCGAGGAGC AGATCGCGCG CAGCGTGGCG
CTCAAGGCCT CGGTCGTGGC CCGCGACGAG CGCGACTCCG GCCTGCGCCA CATCCTCAAC
TACGGGCACA CCCTGGGCCA CGCGCTGGAG ATCGTCACCG GCTTCGAGAT GCGGCACGGC
GAGGGCGTGG CGGTCGGGAC GGTCTTCGCC GGCCGGCTCG CTGCCGCGCT GGGCCTGATC
GACGACCGGC GCGCCGACGA GCACTTCGAG GTGGTCTCGC ACTACGGACT GCCGACGGCG
CTGCCCGCCG GGGCCGACAC GGCGGCGCTC GTCGCCGCCA TGCGGCTGGA CAAGAAGTCC
ACGAACACCG GCAAGTCCAC GAACACCGGC CTCACCTTCG TCCTCGACTC GGCGGACGGC
CCCCGGCTGG TTCCGGACGT CCCGGCCGAC CTGGTGGTCG CGACGCTGGG CGCGATGGAA
CGCGAGGCGG CATGA
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| Protein sequence | MTAPSATLGH DDRAGGPGTH RVWVELGDRG YPVDIGPGVR RTLPEVVARI DASRVVIVSA
RPEDDAVPDP GVPALRVAAR DGEPDKNLAN VQALCERFAA FGLTRTDAVV SCGGGTTTDV
VGLAAALYHR GIAVIHLPTS LLAQVDASVG GKTAVNLPAG KNLVGAYWQP SAVLCDTDYL
ATLPAREWTN GYGEIARAHF IGAGDLRGRP VEEQIARSVA LKASVVARDE RDSGLRHILN
YGHTLGHALE IVTGFEMRHG EGVAVGTVFA GRLAAALGLI DDRRADEHFE VVSHYGLPTA
LPAGADTAAL VAAMRLDKKS TNTGKSTNTG LTFVLDSADG PRLVPDVPAD LVVATLGAME
REAA
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