| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1655 |
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| Symbol | |
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| ID | 5670057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1976016 |
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| End bp | 1978445 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240573 |
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| Product | hypothetical protein |
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| Protein accession | YP_001505999 |
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| Protein GI | 158313491 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.662381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.241919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCG CCGGGCCGCT GGTACGGGTC GTGCTCGCCG GTGTCGGCCG GCGCCGGGCG
CAGGCGTCGG TGGTGGCTCT GACCACGCTG CTCGCCGTGA CGGCCTCGGT GCTCGCGCTC
GGTCTGATCG CCGGGTCGCG CGCACCGTTC GACCGCGCGT TCGCAGCCCA GCACGGCGCG
CACCTCACGG TCCAGTTCGA CGCGACGAAG GTGACGGCCG CGCGGCTCGC CGCCACCGGG
TCGGCGGCGC CGGTGGCGCA GGCTGCCGGC CCGTTCCCCG TCGCCGAGCT GCGGCCCCGG
ATCGTCGGCG GCCCGCCGGG ACTGCCCGTC GGGCTCGGAC TGCCATCCCT GACCGTGGTC
GGTCGGAACC AGCCGGACAG CGGCCCCGAT TCGATCGACC AGGTCGCTGT CATCGAGGGC
CGATGGGCCA CCAACCGAGG AGAGATCGTT CTCGACCCGG ACTCCCTGCC ACCCTCGCTG
CTCGGCGCCC GCCTCCAGCT GCCCGACCTG CCCGGAGCCC CCGTGCTGAC CGTGGTGGGT
CTCGCTCACT CGGCCGGTGG CAGCGCCCGG GCCTGGGTCG CGCCGGACGC CCTGGCGGCG
TTCGCCTCGC GGGACGTCCC GGCGGGCCTC CAGATGCTCT ACCGGCTCAC CGCCGCCGGC
ACCGAGAACG CGATCGACTC CGGCCGGGCG GCGATCTCGG CGGGGATGCC CGCCGGCGCG
GTGACCGGGA CCAGGTCCTA CCTGGACGTC CGGGCGGGCG CGCTCGTCCG GACCGCGGTG
TTCACGCCGT TCGTGGCCGC GTTCGGCGTG CTCGGCCTGG CCATGTCCGT GCTGATCGTC
GGCACCGTCG TCGCGGGTGG CGTCGGCGCG ACGATCTGGC GCACCGGGGT GCTGAGATCG
CTGGGACTCA CCCCGGCCCA GGCGGCCGGA GCACACGTCG CCCAGGTGCT CGTCCCGGCC
ACGGGCGGTG TCGGCCTCGG CATCCTGTGC GGCAACCTGC TCGCCATGGT GGTCTTCGCC
GGGTCGGCGG CCGCCTACGG CGCCGTCGCG CCGTCCGTGC CGCTCTGGGT CGACGCGGCC
GTCGGCGCGG GCGCGCTCGC GCTCGTCGCC GTCGCCGCGC TGCTGCCCGC CCTGCACGCC
GGGCGACGCA GCCCCGTCGA CGCGATGCGG CTCGGGCGCG TGCCCCGACC GGGCCGCGGT
CGGTGGGCGG GCCGGCTCGC CGCCCGGCTG CCGCTGCCAC GGCCGTTGAA CCTGGGGCTC
GCCCATCCGT TCGCCCGTCC CGCCCGCTCG GGCGTGCTCG CCGTCGCGGT GGGCTTCGGG
GCGCTGGGGG TCTCGTTCGC GGTCGGCCTG GCCTCGACAC TCGACTCCAT CGCGGCGGAC
AACAGCCGGG ACGAGGCCGG AGCGGTCGTC GTGAGCACCC ACGTCCGGGT GGCGCATGGC
CCGAAGGCGG GAGCCGCGGC ACCGGGGCCG GCACAGGCAC CGGTCGCGGC GGGTGAGGTG
GCGGACGCGG GCGATGCCGC GGACGTGGCC AAGGTGATCG CGGCGCAGCC GGGTACCGCC
CGCTTCTTCA CCAGCGCGCA CGCCGAGGTG TACGCGCTCG GGATCGTCGG GCCGGTGACG
GTCACCGCCC ACACCGGCGA CTCATCCTGG GGCGCACGTC CGATGATCTC CGGTGACTGG
TTCCGGGGGC CGGGCGAGGC GGTCGCCGAC ACGCGGTTCC TGGACGAGAC CGGCACGGGG
ATCGGCGACA CCGTGACCGT CACCGACCAC GGGGCGTCGG TGGCCCTGCG GATCGTCGGC
GAGGTCTTCG ATCTCGATGA CGACACTGTC GACCTCGCCA CCGACGAGAC CTCGCTGCGC
GGTCTCGATC TCGGCCTGGC CGTCGACAGT TTCAGCATCG ATCTCCAGCC GGGGACCGAC
CTGGTGCGCT ATGTCGACAC CCTGCAGGAA GCGCTCGCCT CCCACCCGGC GGTGGTGCGG
GCGAACATCG AGGAGGGCTC CGAAGTGATC GCGGTCATGG ACGCGCTGAT CGCCTCGCTC
ACGCTGCTCC TGGTGGTCGT CGCGGGCCTC GGCGTGCTCA ACACCGTCGT CCTGGACACC
CGGGAGCGTG TCCACGACCT CGGTGTCGTC AAGGCGGTGG GCATGACGCC GCGGCAGGTC
CTCGCGATGG TGCTGACCTC GGCCGGGGGC ATCGGCGTCT GCGCCGCGGC GATAGGGGTG
CCGGCCGGCG TCGCGCTGCA CCACCGCGTC GTCCCGCTGA TGGGCACGGC CGCCAGGACC
GGCATGCCAC GGGCGTACAT CGACGTGTAC GGCCCAGTGG CCGCAGCCCT GCTGGTCCTC
GGCGGCCTGC TGATCGCGGT GCTCGGCGCC CTGGTCCCGG CCGGCTGGGC GGCCGGGACC
AGGGCCACGA CCGCGCTGCG GGCCGAATGA
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| Protein sequence | MNPAGPLVRV VLAGVGRRRA QASVVALTTL LAVTASVLAL GLIAGSRAPF DRAFAAQHGA
HLTVQFDATK VTAARLAATG SAAPVAQAAG PFPVAELRPR IVGGPPGLPV GLGLPSLTVV
GRNQPDSGPD SIDQVAVIEG RWATNRGEIV LDPDSLPPSL LGARLQLPDL PGAPVLTVVG
LAHSAGGSAR AWVAPDALAA FASRDVPAGL QMLYRLTAAG TENAIDSGRA AISAGMPAGA
VTGTRSYLDV RAGALVRTAV FTPFVAAFGV LGLAMSVLIV GTVVAGGVGA TIWRTGVLRS
LGLTPAQAAG AHVAQVLVPA TGGVGLGILC GNLLAMVVFA GSAAAYGAVA PSVPLWVDAA
VGAGALALVA VAALLPALHA GRRSPVDAMR LGRVPRPGRG RWAGRLAARL PLPRPLNLGL
AHPFARPARS GVLAVAVGFG ALGVSFAVGL ASTLDSIAAD NSRDEAGAVV VSTHVRVAHG
PKAGAAAPGP AQAPVAAGEV ADAGDAADVA KVIAAQPGTA RFFTSAHAEV YALGIVGPVT
VTAHTGDSSW GARPMISGDW FRGPGEAVAD TRFLDETGTG IGDTVTVTDH GASVALRIVG
EVFDLDDDTV DLATDETSLR GLDLGLAVDS FSIDLQPGTD LVRYVDTLQE ALASHPAVVR
ANIEEGSEVI AVMDALIASL TLLLVVVAGL GVLNTVVLDT RERVHDLGVV KAVGMTPRQV
LAMVLTSAGG IGVCAAAIGV PAGVALHHRV VPLMGTAART GMPRAYIDVY GPVAAALLVL
GGLLIAVLGA LVPAGWAAGT RATTALRAE
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