Gene Franean1_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1641 
Symbol 
ID5670043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1957535 
End bp1957927 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content69% 
IMG OID641240559 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001505985 
Protein GI158313477 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCG CCAAGGATCT GGTGGCCGCC TCGGCGACGC CGATCGTGCT CGGCATCCTG 
GCGGAGGAGG AGAGCTACGG CTACGCGATC CTCAAGCGGA TCAACGAGCT GTCCGGCGGC
GAGCTGGACT GGACCGAGGG CCTGCTCTAC CCGTTGCTGC ACCGGCTTGA GCGCCTCGGT
CATGTGGAGT CGAGCTGGCG GTCGGCCACC GGCGAGCGCC GGCGCAAGTA CTACCGCATC
ACCGACACCG GCCTGGCTGA ACTGGCCGAG CAGCGCCGTC AGTGGGACAC GGTCGTGGAC
GCGCTCAAGG AGATCTGGAC GGGCCTCGGC GACCGCGGCC CGCTGACGGC CATCCCAGCC
ATCCCGGCGA TCCCAGTGGA GGGCCACGCA TGA
 
Protein sequence
MKVAKDLVAA SATPIVLGIL AEEESYGYAI LKRINELSGG ELDWTEGLLY PLLHRLERLG 
HVESSWRSAT GERRRKYYRI TDTGLAELAE QRRQWDTVVD ALKEIWTGLG DRGPLTAIPA
IPAIPVEGHA