Gene Franean1_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1628 
Symbol 
ID5670030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1944731 
End bp1945426 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID641240546 
ProductNmrA family protein 
Protein accessionYP_001505972 
Protein GI158313464 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.927129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CGATCTTCGG AGCCAGCGGG GCCACGGGGC GCCTCTTGGT GCGACAGGCA 
CTCGACGCGG GCCACGCCGT GACGGCGGTG ACGCGTTGCC CGGCGGAGTT CCCGCTGGCC
GGTGAGCAGC TCACCGTCAT CGGGGGCGAT GTGTCCGACG GGGCCGCCCT CGCGCCGGCG
ATCAAGGGCG CCGACGCGGT GCTGTCCAGC CTGGGGGTGC CGTTCACCCG TGGCCCGATC
ACCGTCTACA GCCGCGGCGC CGCGAAGATT CTCGAGGCGA TGACGCGGCA CGGTGTGAAA
CGGCTGGCCG TCGTCAGCTC GACGGCGGTC GAACCCCACC CCCACCGCGA GGGCGGGTTC
CTGCTCAACC GGGTCATGCA GCCGATGATC GTCAGGACGA TCGGCAGGAC CACGTACGCG
GACATGCGGG CCATGGAGCA GATCGTCCGC GAGAGTGACG CGGAATGGAC GATCATCCGA
TCCTCGGGGC TGTTCGATGC CGACCACGTC TCGCGCTACA CCGTCAGCGA CGGCCCGCTG
GACGGAGTCT TCACCAGCCG TGCCGACCTG GCCCACTGCC TGCTGACGCA GGCCACCGGG
AAGCGGTTCG TCGGCCGGAC GGTCGAGATC ACGACCAGCG AGAACGCCCC GACACTCCTA
CAGGTGATCC GGCGGGAGGC GTTCGGCCGT GACTGA
 
Protein sequence
MKITIFGASG ATGRLLVRQA LDAGHAVTAV TRCPAEFPLA GEQLTVIGGD VSDGAALAPA 
IKGADAVLSS LGVPFTRGPI TVYSRGAAKI LEAMTRHGVK RLAVVSSTAV EPHPHREGGF
LLNRVMQPMI VRTIGRTTYA DMRAMEQIVR ESDAEWTIIR SSGLFDADHV SRYTVSDGPL
DGVFTSRADL AHCLLTQATG KRFVGRTVEI TTSENAPTLL QVIRREAFGR D