Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1628 |
Symbol | |
ID | 5670030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1944731 |
End bp | 1945426 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641240546 |
Product | NmrA family protein |
Protein accession | YP_001505972 |
Protein GI | 158313464 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.927129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA CGATCTTCGG AGCCAGCGGG GCCACGGGGC GCCTCTTGGT GCGACAGGCA CTCGACGCGG GCCACGCCGT GACGGCGGTG ACGCGTTGCC CGGCGGAGTT CCCGCTGGCC GGTGAGCAGC TCACCGTCAT CGGGGGCGAT GTGTCCGACG GGGCCGCCCT CGCGCCGGCG ATCAAGGGCG CCGACGCGGT GCTGTCCAGC CTGGGGGTGC CGTTCACCCG TGGCCCGATC ACCGTCTACA GCCGCGGCGC CGCGAAGATT CTCGAGGCGA TGACGCGGCA CGGTGTGAAA CGGCTGGCCG TCGTCAGCTC GACGGCGGTC GAACCCCACC CCCACCGCGA GGGCGGGTTC CTGCTCAACC GGGTCATGCA GCCGATGATC GTCAGGACGA TCGGCAGGAC CACGTACGCG GACATGCGGG CCATGGAGCA GATCGTCCGC GAGAGTGACG CGGAATGGAC GATCATCCGA TCCTCGGGGC TGTTCGATGC CGACCACGTC TCGCGCTACA CCGTCAGCGA CGGCCCGCTG GACGGAGTCT TCACCAGCCG TGCCGACCTG GCCCACTGCC TGCTGACGCA GGCCACCGGG AAGCGGTTCG TCGGCCGGAC GGTCGAGATC ACGACCAGCG AGAACGCCCC GACACTCCTA CAGGTGATCC GGCGGGAGGC GTTCGGCCGT GACTGA
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Protein sequence | MKITIFGASG ATGRLLVRQA LDAGHAVTAV TRCPAEFPLA GEQLTVIGGD VSDGAALAPA IKGADAVLSS LGVPFTRGPI TVYSRGAAKI LEAMTRHGVK RLAVVSSTAV EPHPHREGGF LLNRVMQPMI VRTIGRTTYA DMRAMEQIVR ESDAEWTIIR SSGLFDADHV SRYTVSDGPL DGVFTSRADL AHCLLTQATG KRFVGRTVEI TTSENAPTLL QVIRREAFGR D
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