Gene Franean1_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1621 
Symbol 
ID5670024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1938238 
End bp1939146 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID641240540 
Productenoyl-CoA hydratase 
Protein accessionYP_001505966 
Protein GI158313458 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCG ACAACGCGAC CGACAGCCCG ACCACAAACC CGACCGGCAG CGCGGGTAAC 
GGCGCGGCCG GCAGCGCGAC GCGGCCCGAG CAGGTCGGCT ACGAGGCCGA GCACGTCGAC
TACGAGGTTG TTGACGAGCA CATCGCCGTC ATCACACTGA ACCGGCCGCA GGCCGCCAAC
GCGCAGAACG CCAAGGTTCT GCGCGAGCTC GACGAAGCCT GGCAGGCCGC CGACGCCGAT
GCCGAGGTCC GGGTCATCAT CCTGAGATCG ACCGGGAAAC ACTTCTCGGC CGGCCACGAC
ATGTCCGGCA CCGAGAGCGA CGTCCCGCGC CCGGCCTGGA CGCCCGACAG CGGCTACGAC
TGGGAGACCC GGCACTACCT GCACTATGCG AAGACCTGGC GGGACATCCC GAAGCCGTCG
ATCGCCGCCG TCCAGGGCAA GTGCATCGCC GGTGGGCTCA TGCTCTGCTG GCCCTGCGAT
CTCATCGTCG CCGCCGACAA CGCCGAGTTC TCCGACCCCG TCCTGCACAT GGGCATCGGC
GGCGTGGAGT ACCACGGTCA CACCTGGGAG CTCGGGGCCC GCAAGGCCAA GGAGCTGCTG
TTCACCGGCG GTCCCGTCAC GGCCGCCGAG GCGCTCGGGC TCGGCATGGT CAACAGGGTC
GTCCCGCTCG ACGACCTGTA CCCGGCCACC CTGGAGCTTG CCCGCCGCAT CGCCCGCCAG
GACCCGTTCG CGCTGCGCAT GGCCAAGCGC GCCGTCAACC ACACCCTGGA CGTCCAGGGT
TTCAGCACCG CCGTCGACTC GGTGTTCGAC ATGCACCACC TCGCCCACGC CCGCGCCGCG
CTGCGGAACA ACGGGACTCC CTCCCTCGCC GGGCTGACGT CCATGAAGAA CCGCGGCAGG
TCCTCGTGA
 
Protein sequence
MHPDNATDSP TTNPTGSAGN GAAGSATRPE QVGYEAEHVD YEVVDEHIAV ITLNRPQAAN 
AQNAKVLREL DEAWQAADAD AEVRVIILRS TGKHFSAGHD MSGTESDVPR PAWTPDSGYD
WETRHYLHYA KTWRDIPKPS IAAVQGKCIA GGLMLCWPCD LIVAADNAEF SDPVLHMGIG
GVEYHGHTWE LGARKAKELL FTGGPVTAAE ALGLGMVNRV VPLDDLYPAT LELARRIARQ
DPFALRMAKR AVNHTLDVQG FSTAVDSVFD MHHLAHARAA LRNNGTPSLA GLTSMKNRGR
SS