| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1618 |
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| Symbol | |
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| ID | 5670021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1935780 |
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| End bp | 1936715 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240537 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001505963 |
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| Protein GI | 158313455 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.340872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTGC GCCAGTTGGA GTACTTCGTC GCGGTCGCCG AGGAGCGGAA CTTCACCCGG
GCGGCCGAGC GCAGCCACGT CAGCCAGTCC GGAGTCAGCG CACAGATCCG CCAGCTCGAA
CGGGATCTCG GCGCCGAGCT GTTCGACCGG TCCGGTCGCG CCGCGACGCT CACCCCCGCG
GGGGAGGCCG CGCTGGAATG TGCGCGTGCC GCGCTCGCCG CCACCGCGGC CCTGCGCCAG
GCGGTCGGCG AGGTCACCGG CCTGATCCGC GGCCAGCTCA CCGTCGGGAT GGTCACCGGC
TGCACCGTCA CGCCGCTGTT CGACGCCCTC GCCGGTTTCC GCGGTGCCCA CCCAGGGGTG
GACGTCTCCC TGCTGGAAGG CAACTCCGAC CAGCTCGTCT CGGAGGTCCG TGCCGGGACG
GTCGACCTGG CCCTGGTGGG CAGCGCCGCC CCGGCCCCCG AGGGACTGGG GGCGCTGACG
ATCGTCGAGG AGCGGCTGGT GGCGGCCGTC CAGCCCGGTC ACCTCCTGGC GGAGCGGCCC
CGGATCACCC TGCGTGACCT GTGTCGGCAT CCGATCGTGT GCATGCCCCC CGGTACCGGC
CTGCGCACCG TGTTCGACCG GGCCTGCCAG ACCTGCGACC TTCACCCCAG AATCACGTTG
CAGGCCAGCG CGCCGGACGC CATCGCCGAC CTCGCCGGCC GGGGCCTGGG CGTGGCCGTC
CTCAGCACGT CCATGGTGGC GGCGTACGGC GACCGGCTCG TCGCGCTACC CGTGGACGGC
CTCGACCTAC CGGCGCTGCT CACCCTCGTC TGGCGCGCCC CGGCCAGCCC CGCCGTCCGC
GAACTGCTCG CCCACGCCCG CCGGGCCTTC GCCGTCCCCG ATCCGGACGG TCCCGCGAAC
GGTGTTCCAG CCCCGCCACG GCAGACCCCC ACCTGA
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| Protein sequence | MELRQLEYFV AVAEERNFTR AAERSHVSQS GVSAQIRQLE RDLGAELFDR SGRAATLTPA
GEAALECARA ALAATAALRQ AVGEVTGLIR GQLTVGMVTG CTVTPLFDAL AGFRGAHPGV
DVSLLEGNSD QLVSEVRAGT VDLALVGSAA PAPEGLGALT IVEERLVAAV QPGHLLAERP
RITLRDLCRH PIVCMPPGTG LRTVFDRACQ TCDLHPRITL QASAPDAIAD LAGRGLGVAV
LSTSMVAAYG DRLVALPVDG LDLPALLTLV WRAPASPAVR ELLAHARRAF AVPDPDGPAN
GVPAPPRQTP T
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