| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1585 |
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| Symbol | |
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| ID | 5669988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1893060 |
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| End bp | 1896002 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240504 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001505930 |
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| Protein GI | 158313422 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.79609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0274178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCGGA TCCGGCTGCT GGGCGAGGTC GGTGCCGTCA CGTCCGGCGG CGAGCCGGTC
GACGTCGGCC CGGCCAAGTG TCAGGCGCTG CTCGCCGCGC TCGCGCTCGC GCCCGGCAAG
GTCGTGCCGG TCGGGAGGCT GGTGGAGCTG GTCTGGGGCC CGCACCCGCC CAGGACGGCC
GACCGCACCC TGCAGTCGTA CGCCACCCGG CTTCGCAGGG CGCTCGGTCC CGGTTCGATC
CGCCGGGTCG GCGCCGCCTA CCTGCTGGAT GTCGTGCCGG AGGCGGTGGA CGTCGTCCGC
TTCCAGCGAC TGCTCGACGA GCGGGACGTC GCCGCCGCCC TCGCCGAGTG GGCGGGCCCG
CCGCTGGCCG GGCTGGTCGT CCCCGGCCTG GCCGGAGCCG TCGACGGGCT GGTCGAGCAG
TGGCTGGCCG CCGTGGAGGT GGATCTGGCG CGCCAGGTGG AGACCGACGC GCGTTCCGCG
CTGGGCCGGC TCACCGAGCT GACCGCCGCC TACCCGCTCC GCGAGGGCCT GTGGGCGCTG
CTCATGACGG CGCTCTACCG GGCCGGGCGC CCGTCCGAGG CCCTGGCGGC GTTCCGCGCC
GCCCGCCGGC ACCTGGTCGA CACCCTCGGG GTGGAGCCGG GGCCGGCGCT ACGCGAGCTC
GAGGCACTGG TCCTGGAGCA CGACAGACGG CTCCTGCCGC CCGGCGAGGG ATTCGCCCAG
GTCGGCGAAC ATCCCGTCCC GGGCGAGCGC CCGGGCAATC TTCCCCGCCG GCTGGGGCGG
CTACTCGGCC GCGATCATGA TCTGGAGGCC GTCGGCGGCG CGCTGGCCGT CTCACCCGTC
GTGACCCTGG TGGGGCCGGG TGGGATCGGC AAGACCCGGC TGGCCCTCGC GGCGGCGGCG
CGGCACCTCG ACGCGGACGG CGTCTGGCTG GTCAAGCTCG CCGAGATCGC GGCGCCGTCC
GATGTGGCGC GGGCGGTCGC CGGTGTCGTG GGCGTGACGG AGAGCTCCGG GCGCCCGCTG
GGCGAGTCCG TCGTGGCGGC GCTGCGCCAT CGCCGGGTGC TGCTCGTCCT GGACAACTGC
GAGCATGTCG TCGACGGCGC CGCGGCGCTC GCCCAGGCGA TCGCCGAGGG CTGCCCCGAG
GTGCGGATCC TCGCCACCTC CCGGGAGCGG CTCGACCTCG GGCACGGCTT CGAGCGGCTC
GTCGCCGTGG GCCCGCTGGA GCCCGCAGGG GCGGCCGCCG AGCTGTTCGC GCAGCGTGCC
CGCGCGGTCT TCCCCGCCTT CGACGCGCGG GCCGGCCGCG CCGAGATCAC CGAGATCTGC
CGCCGTCTCG ACGGCCTCCC GCTGGCCATC GAGCTGGCCG CCGCCCGCAC CGCGGCCCTC
GGCCTCACCG ACCTGCTCGA ACGTCTCGAC GACCAGCTGC GCCTGCTCGT CGGCGGCGCG
CGGACGGCCG ACGAGCGCCA CCGGACGCTG CGCGCCACCG TGCGGTGGTC CTACGACCTG
CTCGCTCCCG CCGCGCAACG CCTGTTCCGG CAGCTGTCCG TCTTCGCCGG GCCGTTCGAC
CTGGGCGCAG CCGCCGCCGT CGCGGCAACC ACCGTCGCGG CAACCGCCGA AAGCAACGGT
GCGGACGGCT CGCGCGCCGC CGGCTGGCCG GGCGACCCGG GCACGGCCGA CGTGGGCGGC
GCGGGCGGCG CGATGGGCGA GGTGGAGGAC CTGCTCGGTG ACCTCGTGGC GCGGTCGATG
CTCGTGGCGG AGACCGGGCC GTTCGGGCGG CGCTTCCGGC TTCTGGAGAC GATGCGCCAG
TTCGCCGCCG AACGGCTCGC TGATGCCGGT GAGACCCGGC AGGCGACCGC ACGGCACGCC
CGGTGGTGCC TGAAGGCGGC CACCCGCGTC CAGGTGCTGC TCGCCGGTCC GGCCGAGGTC
GAGGGCGTCG CCCGTCTCGA CGAGCTCTGG CCCAACCTGC GGGCCGCGTT CGACCGGGCG
TGCGCGGCCG GTGACACGGC GCTGGCCCGG GCGCTCGTGC GCCGCGTCGT CGTGGAGATC
GTCCGCCGCA GCCGCCACGA GATCGGCGAC TGGATCGAAC GGCTCCTGGC GCTCGGGCAG
CCGGGGGCGG AGCCGGACCC CGACCTCGTC GTCTTCGCGC TCACCTGGGC GGCGCAGCGC
TACAAGATGA GCCAGGACAG CGCCGCCTAC GAACGACTCG TCGAACGCCA CGGCGAGCCG
GACCATCCGT TGGTCCGCCA TGCGCGGGCG TCCGTCTACG AGGACTACCC GGCCCATGTG
ACCTGGGCCG CGCCGGCCGT GGCGGAGCTG CGCCGGCACG GCGCGGACGA CCTGGCCGAG
CAGTTCGAGC TGGACGTCGG CGCGGCCCTG CTGTTCACCG GCCGGTTCGC CGAGCACGAC
GCCGCGGTCG GGGCGCTGGT CGAGCGGTAC CGCCGGCAGG GGCCGCCCAC CCTGCTGAAC
CTGACTCTGG TGCTGCTCGG CTACTCGGCG CTGCTGCGCG GCCGGCACGA CCACGCCGAC
CGGCTGTTCG ACGAGGCCGT CGGCGTCGAG GTGCCAGCCC GGACGCACTC GCCGAACCGG
GCCGTCCAGG CCCGGGCGGT CTTCCGACGC GGTGAGCGGG CACAGGCGTT CGCCATCCTG
CACTCGCACG TCGAGCAGCT GCTCGACGAC GGGAACATGC AGGCCGTCTG CGTCACCACG
GTCGAGTTCG TCAACATGGC GGCGGCCGTC GGCCGGCTCG AGGACGCGGC ACGCATGCTG
GGCTTCCTCG AGACGACCGG CCTGCTCGAG CATCCCGCGT GGCGGACGCT CGTCGACGGC
GCGACGGCCC GGGTCGCCGC CGACCCCCGC GTCGACCCGG AGCGGGAACG GGCCGGCGGC
CGGCGGCTGG ATGACCGCCA GGCGCTGGAG TACATGCGCG GCGTCCTGGG CCTCCTCACC
TGA
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| Protein sequence | MLRIRLLGEV GAVTSGGEPV DVGPAKCQAL LAALALAPGK VVPVGRLVEL VWGPHPPRTA
DRTLQSYATR LRRALGPGSI RRVGAAYLLD VVPEAVDVVR FQRLLDERDV AAALAEWAGP
PLAGLVVPGL AGAVDGLVEQ WLAAVEVDLA RQVETDARSA LGRLTELTAA YPLREGLWAL
LMTALYRAGR PSEALAAFRA ARRHLVDTLG VEPGPALREL EALVLEHDRR LLPPGEGFAQ
VGEHPVPGER PGNLPRRLGR LLGRDHDLEA VGGALAVSPV VTLVGPGGIG KTRLALAAAA
RHLDADGVWL VKLAEIAAPS DVARAVAGVV GVTESSGRPL GESVVAALRH RRVLLVLDNC
EHVVDGAAAL AQAIAEGCPE VRILATSRER LDLGHGFERL VAVGPLEPAG AAAELFAQRA
RAVFPAFDAR AGRAEITEIC RRLDGLPLAI ELAAARTAAL GLTDLLERLD DQLRLLVGGA
RTADERHRTL RATVRWSYDL LAPAAQRLFR QLSVFAGPFD LGAAAAVAAT TVAATAESNG
ADGSRAAGWP GDPGTADVGG AGGAMGEVED LLGDLVARSM LVAETGPFGR RFRLLETMRQ
FAAERLADAG ETRQATARHA RWCLKAATRV QVLLAGPAEV EGVARLDELW PNLRAAFDRA
CAAGDTALAR ALVRRVVVEI VRRSRHEIGD WIERLLALGQ PGAEPDPDLV VFALTWAAQR
YKMSQDSAAY ERLVERHGEP DHPLVRHARA SVYEDYPAHV TWAAPAVAEL RRHGADDLAE
QFELDVGAAL LFTGRFAEHD AAVGALVERY RRQGPPTLLN LTLVLLGYSA LLRGRHDHAD
RLFDEAVGVE VPARTHSPNR AVQARAVFRR GERAQAFAIL HSHVEQLLDD GNMQAVCVTT
VEFVNMAAAV GRLEDAARML GFLETTGLLE HPAWRTLVDG ATARVAADPR VDPERERAGG
RRLDDRQALE YMRGVLGLLT
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