Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1577 |
Symbol | |
ID | 5669980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1884371 |
End bp | 1884901 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641240496 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001505922 |
Protein GI | 158313414 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0171714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGGG CTGATCCGGG CCCTCCGACC CCGCTGTCCG GCGAGGAGGA GGCGTTCCTG CGCGCCTTCG GCCGGGCGCT GCTGATCGTG CCGCGCGCTT TCGACGCCGA CCTGCTGCGC GAGCAGCACA TGTCACTGAA CGAGTACACC GCGCTCATGC TTCTCTCCGA GTCGCCCGGG CTACGGCTGC GCATGAGCGA TCTCGCGGCG GCCTGCTCCC TGTCGATCAG CGGTATGACG CGCATCGTGA GCCGCCTGCA GGCACAGGGC CTGGTGCGGA GGGAGCAGTG CCCCGGAGAC CGCCGCGGCT GGTACGCGGC ACTCACCGAT TCCGGCCTCG CCCGGCTCGA CGCGGCCTGG CCGACCCACG TGGCCAGTGT CCGCAGACAC GTGATGGACC ATCTCGCCGA GGTCGACCTG CCGACGGTGA CCGCCGCCCT GCGACGCTTC GCCTCGGACG CGCCCGCCAC AGCCCCGCCG GACCTGGACC GGCTGGACGC CACCGCCCCC GACCGTTGCG GCCCGGACTG A
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Protein sequence | MTGADPGPPT PLSGEEEAFL RAFGRALLIV PRAFDADLLR EQHMSLNEYT ALMLLSESPG LRLRMSDLAA ACSLSISGMT RIVSRLQAQG LVRREQCPGD RRGWYAALTD SGLARLDAAW PTHVASVRRH VMDHLAEVDL PTVTAALRRF ASDAPATAPP DLDRLDATAP DRCGPD
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