| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1563 |
|---|
| Symbol | |
|---|
| ID | 5669966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1869580 |
|---|
| End bp | 1870479 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641240482 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001505908 |
|---|
| Protein GI | 158313400 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.413404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATTCCG GTATCTGTGT GCCCAATCTC GGTGAATTCG TGGATCCGCG CCGGGTCATG
GACCTGGCGC GGCGAGCCGA GAACGCGGGG TGGGACGGCT TCTTCGTCTG GGACCACGTG
GTCTTCCCCT ACGGCCCGGC CCAGGAGGTG GCCGACCCCT GGGTGCTGCT GACCACGGTG
GCGCTGGCGA CCGAGCGGAT CAGGTTCGGC CCGCTGGTCA CCCCGGTGGC GCGACGGCGT
CCCGGGTCGC TGGCCCGCCA GACCACGTCG CTGGACCGGC TCTCCGGGGG GCGGCTGGTG
TTCGGCTCGG GGCTCGGCTG GACGCTGCCG GCGGAGTACG GCACCTGGGG CGAACCGGTC
GAGCCCCGGG AGGTGGCGCT GCGGCTGGAC GAGGGCCTGG CGGTGCTGGC GGGGCTCTGG
TCGGGGGAGC GCGTGGAGTT CCGCGGCGAG TACCTGACCG CCACCGACGT CACGTTCCTG
CCCACCCCGG TGCAGCGCCC GCGGCCGCCG GTCTGGATCG GCTGCAACTG GCCGAACCGG
CTTCCGCTGC GTCGTGCGGC CCGGTGGGAC GGCATCGCCC CGATGATCAT AAACCCGCGG
GATGGTTCCG CGGAACCGAC GGCCGCCGCG GTGGCCGAGA TCGTCGCCAC CGTCAGCGAG
TACCGGGCCG CCGCCGGGCA GGGGGCCGGC AGTGAGCCCT GCAGTCGGCA GCGGGCCGGC
GGCGAAGTGT TCGACGTGGT GATCACCGGG CGGACCGGGC CGGATGAGCC GGGCGCGGCG
CGGGAGACGG TCGAGTCGAT CGCGGCGGCC GGCGCGACCT GGTGGCTGGA GGGCTTCCGC
CCGGCGCCCG GGGAGTACGC CGCCGCCCTG CGGAGAATCG AGGCGGGCCC GCCGCTCTAG
|
|---|
| Protein sequence | MHSGICVPNL GEFVDPRRVM DLARRAENAG WDGFFVWDHV VFPYGPAQEV ADPWVLLTTV
ALATERIRFG PLVTPVARRR PGSLARQTTS LDRLSGGRLV FGSGLGWTLP AEYGTWGEPV
EPREVALRLD EGLAVLAGLW SGERVEFRGE YLTATDVTFL PTPVQRPRPP VWIGCNWPNR
LPLRRAARWD GIAPMIINPR DGSAEPTAAA VAEIVATVSE YRAAAGQGAG SEPCSRQRAG
GEVFDVVITG RTGPDEPGAA RETVESIAAA GATWWLEGFR PAPGEYAAAL RRIEAGPPL
|
|---|
| |