| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1551 |
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| Symbol | |
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| ID | 5669954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1854025 |
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| End bp | 1857204 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641240470 |
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| Product | zinc finger SWIM domain-containing protein |
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| Protein accession | YP_001505896 |
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| Protein GI | 158313388 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.712758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCCGC AGGCCTCGCT GTGCCTTCGA ACGCCGGTTC GAATGTGGGT GCGGGGCCGC
GAGGACGGAA CGGAACTGTC GGACCCCGTA GGCAGAATCG CCGTCGTGTC GAACACCACC
AGTCCGCCCG TCGAGCGCGG GCAGGCGCTC GCCCTGGCGC CGGATCAGGC GTCCGTGAAG
GCGGGCGAGA GGCTCGCGGT CGCCGGGTCC TGGCCGCTGG CGGGCGGCGA CGCCGAGGCG
CTGTGGGGTG AGTGCAGGGG CAGCGGAAAG TCGCCCTACC GGGTCGTCGT GGCCCTCGCG
GATCATGCCT CGAAGTGCTC GTGCCCGAGC CGGAAGTTCC CCTGCAAGCA CGCCCTCGGC
CTGATGCTGC TCGCCGCGGC CGGCGGCGTG GCCGGTGCCG GCGGCGGGCG TCCGCCGTGG
GCCGCGGAAT GGCTCGACCG GCGGGTGGCG CGCTTCGCCG CGGCGGCGAG CGCGGGCACG
CGGGCCGCCA CCGGGCCTGA GTCCGAGCGC TCCGCGGCGG GGGCGGCCCG GCGCGAGGCG
AGCCGTGCGG CCAAGGTCGA CGCCGGTGTC GCGGAGCTGG CCCGCTGGCT GTCCGACCTG
GCCGGGGAGG GGCTCGGAGC CGCCCAGGCC AGGCCGGCCG ACTGGTGGCG GGCCGCCGCC
GCCCGCATGG TCGACGCGCA GGCACCCGGC CTCGCCGAGA TGATCCACGA GGCCGCGCAG
ATCGCCGGGT CGGCGGCCCG GCGGCCTGAC TGGCCGTCCC GGCTGGTCGA CCGTGTCGGG
CTGCTGCACC TGCTGTGCGA GGGCTGGGCC CGCCGCGCCG ACCTGCCCGC CGACGTCGTG
GCGGTCCTGC GCGACCGGAT CGGTTTCACC GTTCCCGTGG CCACTGTGCT CGCCGGCGAG
CACATCGTCG GCGAGGTCGA CGTGCTGGGG GCGCACGAGT TCGGCGCGGG GCGGGCGCGG
GGGCGCCGGC AGTGGCTACG TCTGGTCGAG TCGGGGCGGC TGGCGGTGCT CGTCGACTTC
GCGGTGAACG GCCAGGGGAT GCCACCGCCG CTGCCCCGGG GCTCGCGGGT CAGGGCCGAT
CTCGCGCCGT ATCCCGGGCG CCGCCCGGCG CGGGTGGCGC CCGGCGCGCC GGGCGGCGCC
GCGGCCGTCG TCGACCCCGT CGGCACAGAT CTCTTCGCGC CCACCTGGCG GGCCGCGCTG
GCCTGCGTCG CGTCGGCCCT GGCGGTCGAC CCGTTCGCGG CCGTCGTCGC GCTGACCGTC
CGCGGTGTCA CGGTGCTGCC GCCGGGCGCC GGGGCCGGTC CGCTGCCCAG GAGCGGTCCG
TGGCTGCTGC GGGACTCCGC CGGCGAGGCG TTGCCGCTCG CCGACGAGGC CGTGGCGCAG
TGGGGCTGGC ACATGCTCGC GGCCGGCGGG GGAGCGGGCC TCGACGTGGT CGCCGAATGG
GACTCGTTCA CCCTGACACC CCTGGCCGCC ACGCCGTCGC GCACCGCGCG GGCGGAGGAC
ATGCCCGGCC GGGCCCCCGT CCCGGTAGTC GCGGCACCGG TCGCCCCGGT GCCGACGCCG
GGGTGGACGG ACCTCGTCGA CGCCGCGGTG ATCGGCGTGA GCCGCCGCCC GTCGCCGGTG
ATTCCCGGGC TCCCTGATCC CGGCGGGCGT CCGGGCGAGG AGGAACGCCT GCTCCGGGTC
GCGGCGCTGG CCGCGGTGAC CAGGCGGGCC GGTCAGCTGG CCGCCGATGC CTCCGCGGTG
CCCGCGCCGC CTCCCGCCGC GGCGGATGAG CACCCACCGT GCCCCCCGAC GGCGGTCGTG
CCCGTTCCCA CCGAGGTGGG CGCCGCCGAG ACAGCCGAGC TCGAGGAGTG GCTGGACCTG
CTGGCCGAAG GAGGCTGGCG CCCGCCGGAC ACCCTGCTTC CCGCGCTGGT CGAGCTCGGC
CGGCGGTCGA CCGAGCTGCG CCCCCGCCTG CTACGGGTCC TCGGCCCGCG CGGCCGCTGG
TTCGCCGCGC TCCACCCGGA CGCCGGCTGG GCGGGGCCCG TCGGCGTCGC GGGCTGGCCG
AGCGCGAGCG CGCAGCAGCG CCGATCCCTC ATCGCCGCGC TGCGGCACAC CGACCCGGCG
GCCGCCGCCG AGCTGCTGCG CGGCGGCGCG GGCGAACCTC CCTTCGTCCC GTTCCGCCGG
GCCGGCGGAG CCGAGCGCCT CGCCTTCGTC CAGGCGCTGC GCACCGGCCT CGGCCCGTAC
GACGAGGAGC TGTTGGAGGC AGCCCTGGAC GACCGCCGGT CCGACGTGCG CGACGCGGCG
GTCCAGGTTC TGCTGGAACT TCCCGGTACC CGTTTCGCGG CGCGGGCCGC CGCCCGCACC
GAGCGGGCCT TCACGGTGCA TCGCGGCACC CTGCGCGTGC ACCCGCCGGC GGTGCTCACC
GACGAGATGG CGCGGGACGG CGTCTCGCCT GACGGGCCGT CCCGCGCCAG GGCGCAGGCC
GACGGGCCGG CCCGGATGCT GCTCGCGGAG ATCGCCCGGG TGGACCCGCG GCTGTGGCCG
GAGCGGACCG GCCTGTCCCC GCAGAAGTTC CTGAGCGCCA GGGCGCTCTG GGAGCCCGCG
CCGAGCTTCC CCGCGCTGAC CCTGGCGCCC TACCTCGTCG GCCCGGTCGT CCGGCACCGT
GACCCGGAAT GGGCGCTCGC GCTGATCCCG AAGGTCGAAC CGCGCTCGCA GGGGGTGCTG
ATCGGCTGCC TGCCGGAGCC CGACCGGCTG CGCGCGTTCG ACCTCGCCCT GAGCGGGACC
GGCCATGCCA CGCAGCGCTG GGGCCTGCTC CTCGGCAGAT CCGGCGGGCA CGGCCTCGGC
AACACCGCCC TGGGGAACCT CATCACGCTT CTCGCCGGGA TACCCGGGCC CTGGTCGGCG
GAATTCACCC GGGCGGCCGG CCCCGCCATC ACGGCCATCG TCACCGCACC GGTCGACGCA
CCGGGCTCCG ATCCCCAGCA GCGGGCAACG GCCCGCACGC TGCACGCCCG GGTGCGGGCG
CTGCTCGCCA ACCTCGCCTG GCGGGTGGAG CCGTACGTCG GCATCCCCGA CCTGGACCCG
TCCACCATGC CGGCCGAGAC GGTGTCCGGC TACCAGCGCC TCGCGGCCGT GCTCGCCCAG
CGGCGAGCCC GCCGCGACAC CCTGCTCTCC CGTTCGAGCT CGAAGAAAGG CTCGTCATGA
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| Protein sequence | MWPQASLCLR TPVRMWVRGR EDGTELSDPV GRIAVVSNTT SPPVERGQAL ALAPDQASVK
AGERLAVAGS WPLAGGDAEA LWGECRGSGK SPYRVVVALA DHASKCSCPS RKFPCKHALG
LMLLAAAGGV AGAGGGRPPW AAEWLDRRVA RFAAAASAGT RAATGPESER SAAGAARREA
SRAAKVDAGV AELARWLSDL AGEGLGAAQA RPADWWRAAA ARMVDAQAPG LAEMIHEAAQ
IAGSAARRPD WPSRLVDRVG LLHLLCEGWA RRADLPADVV AVLRDRIGFT VPVATVLAGE
HIVGEVDVLG AHEFGAGRAR GRRQWLRLVE SGRLAVLVDF AVNGQGMPPP LPRGSRVRAD
LAPYPGRRPA RVAPGAPGGA AAVVDPVGTD LFAPTWRAAL ACVASALAVD PFAAVVALTV
RGVTVLPPGA GAGPLPRSGP WLLRDSAGEA LPLADEAVAQ WGWHMLAAGG GAGLDVVAEW
DSFTLTPLAA TPSRTARAED MPGRAPVPVV AAPVAPVPTP GWTDLVDAAV IGVSRRPSPV
IPGLPDPGGR PGEEERLLRV AALAAVTRRA GQLAADASAV PAPPPAAADE HPPCPPTAVV
PVPTEVGAAE TAELEEWLDL LAEGGWRPPD TLLPALVELG RRSTELRPRL LRVLGPRGRW
FAALHPDAGW AGPVGVAGWP SASAQQRRSL IAALRHTDPA AAAELLRGGA GEPPFVPFRR
AGGAERLAFV QALRTGLGPY DEELLEAALD DRRSDVRDAA VQVLLELPGT RFAARAAART
ERAFTVHRGT LRVHPPAVLT DEMARDGVSP DGPSRARAQA DGPARMLLAE IARVDPRLWP
ERTGLSPQKF LSARALWEPA PSFPALTLAP YLVGPVVRHR DPEWALALIP KVEPRSQGVL
IGCLPEPDRL RAFDLALSGT GHATQRWGLL LGRSGGHGLG NTALGNLITL LAGIPGPWSA
EFTRAAGPAI TAIVTAPVDA PGSDPQQRAT ARTLHARVRA LLANLAWRVE PYVGIPDLDP
STMPAETVSG YQRLAAVLAQ RRARRDTLLS RSSSKKGSS
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