| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1542 |
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| Symbol | |
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| ID | 5675682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1842253 |
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| End bp | 1843851 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641240461 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001505887 |
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| Protein GI | 158313379 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.95287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.532549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGC CCGTCATCGC CGACGATCAG CGGACGCGGT CCGCGCCAGC GGAGGGCACC
GGCGGCCGGC GGGGCAATCC CTGGTGGACG CTGACGAGTG TCGCCCTCGG CGTGATCATG
GTCGGCCTGG ACGGGACGGT CGTCTCGATC GCGAACCCGC GCATCGCCGA GGATCTCGGC
GCCTCACTGA CCGACCTGCA GTGGATCACG AACTCCTACC TGCTCGCCCT GGCCGCCCTG
CTGGTGTTCG GCGGCAAGCT CGGCGACCGG TACGGCCGCA AGCTGATCTT TCTGATCGGC
GTGGTCGGGT TCGGGCTCAC CTCACTGGCC ATCGGCCTGG TCGGCAACAT CGTCGGGATC
ATCGCGCTCC GGGCGCTCCA GGGCGTGTTC GGAGCCATGC TGATGCCGAA CACGCTGGCC
ATCCTGCGCG GCGCGTTCCC GCCCAAGGAG CTGAACCGGG CGATCGGCAT CTGGAGCGGC
GCGTCGTCCA TCTCGATCGC CGGCGGACCG ATCATCGGCG GCCTGCTGGT CGAGCACGTG
AGCTGGGAGT CGGTCTTCTA CATCAACGTG CCGATGGGCG CGATCGCGCT GGCCGTGGGC
CTGGCGGTGC TGCGTGAGTC CCGCAGCGAG AGCACCGGGC AGCGCCACGA CATCCCCGGC
ATCATCACCC TGTCCGGCGG CCTGGTCGGC CTTGTGTTCG GCCTGATCAA GGCGTCGACC
TGGGGCTGGA CAGACCCGAA GACGCTCGGC TGCGTCTTCG CCGGGCTGGC CGTGCTGGTG
CTGTTCACGG TGATCGAGAC CCGGGTGGCC GCTCCCCTGC TGCCGATGCG GCTCTTCGGC
AACCGGTCGA TCTCGGTGGG CAGCGCTGTT CTCGTCATCA ACTTCTTCGC GCTGTTCGGT
GTGCTGTTCT TCGTCACGCT GTTCCTGCAG AACGTCCAGG ACACCTCGCC GATCGAGACC
GGTGTCCGCA TTCTGCCGCT GACCCTGGCG ATGATGATCA TGTCACCGAT CGCAGGCAGC
GCCACCGAGC GGTTCGGGCC CCGCCCGCCG ATGGTGATCG GCCTGGTGCT GTCCGGGACG
GCACTGCTCC TGTTGACCGG GCTCGAGCCC GGCTCCAGCT TCAACGCGCT GTGGCCGTCG
CTGCTGATGC TCGGCATCGG GATGGGCCTG GTCATCACGG CCAGCGCGGA GGCGATTGTC
GGCAACGCAC CGGTCGACGA CGCCGGGGTC GCCGGTGGCC TGCAGACCAC GGCGTTGCAG
CTCGGCGGGG TCGTCGGGAC GGCCGTCCTG GGCTCGGTGC TCAGCAGCCG CGTGGCATCG
GTCATGGTCG ACAAGCTGAC CGGCGCCGGC ACCCCCACCG AGGTCGCGAA CCGGCTGACC
GGCTCGGAGC AGCTCATCAG CCAGGGAGTG GCCCCCCAGG TGACCGGCGC GTCGGAATCC
GTCCAGGCCG CCGTGACCGC GGGCAGCCAC GCGGCCTTCA TCACCGGCCT GCACGTCTCC
CTCGTCGTCG CCGGCATCGC GACGCTCGTC GCGGCCGGGC TGGCCCTCCT GGTCCGGCGC
GGCGACAGCA GCGGCGGAAC CCCCGTCGTC GTGCACTGA
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| Protein sequence | MSQPVIADDQ RTRSAPAEGT GGRRGNPWWT LTSVALGVIM VGLDGTVVSI ANPRIAEDLG
ASLTDLQWIT NSYLLALAAL LVFGGKLGDR YGRKLIFLIG VVGFGLTSLA IGLVGNIVGI
IALRALQGVF GAMLMPNTLA ILRGAFPPKE LNRAIGIWSG ASSISIAGGP IIGGLLVEHV
SWESVFYINV PMGAIALAVG LAVLRESRSE STGQRHDIPG IITLSGGLVG LVFGLIKAST
WGWTDPKTLG CVFAGLAVLV LFTVIETRVA APLLPMRLFG NRSISVGSAV LVINFFALFG
VLFFVTLFLQ NVQDTSPIET GVRILPLTLA MMIMSPIAGS ATERFGPRPP MVIGLVLSGT
ALLLLTGLEP GSSFNALWPS LLMLGIGMGL VITASAEAIV GNAPVDDAGV AGGLQTTALQ
LGGVVGTAVL GSVLSSRVAS VMVDKLTGAG TPTEVANRLT GSEQLISQGV APQVTGASES
VQAAVTAGSH AAFITGLHVS LVVAGIATLV AAGLALLVRR GDSSGGTPVV VH
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