Gene Franean1_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1535 
Symbol 
ID5669939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1837939 
End bp1838367 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content71% 
IMG OID641240455 
ProductArsR family transcriptional regulator 
Protein accessionYP_001505881 
Protein GI158313373 
COG category[K] Transcription 
COG ID[COG1777] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0449302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCG CCGTGGCCGA GAATGTCGAC GACGACCTCT GGTCCGCGAT CGGGGACCCG 
ACCCGGCGCC GGATGCTCGA CCTGCTGCTC AGCGAGGGCC ACGGCACCGC GACCACGCTG
AGCCAGCGGC TGCCGGTCAC CCGCCAGGCG GTGGCCAAGC ACCTCGTCAT CCTCGACCGG
GTCGGCCTCG TCCACGCGAC CCCGGCGGGC CGGGAGAAGC AGTATCGGGT GGACGGCGCC
CAGCTCGCCC GCGCGGTGGC CCAACTGTCG TCCGTCGGGT CGGCGTGGGA CGCCCGACTA
CAGCGGATCA GGCACATCGC CGAGTCGATC CAGCGCACCC AACGCGCCGT CGTCTTCGAG
GATCATGAGG ACGGCCCTGC CCCACCAGAC AGGGGACATG CTCCGTCCGG GCCATGCCAG
GGAGGATAA
 
Protein sequence
MRTAVAENVD DDLWSAIGDP TRRRMLDLLL SEGHGTATTL SQRLPVTRQA VAKHLVILDR 
VGLVHATPAG REKQYRVDGA QLARAVAQLS SVGSAWDARL QRIRHIAESI QRTQRAVVFE
DHEDGPAPPD RGHAPSGPCQ GG