Gene Franean1_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1532 
Symbol 
ID5669936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1834483 
End bp1835007 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content70% 
IMG OID641240452 
Productferric uptake regulator family protein 
Protein accessionYP_001505878 
Protein GI158313370 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0229059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCCT GGTTACTTTC TGGTTTTCTT GACTGGTTCC AGAAAATGGG TGACCATGTG 
GTGGTGGCCA CAGCGGAGGA CTTCCGGCGG ATGTTGCGCG GGGCCGCGCT GCGCGTCACC
CGTCCGCGGG TGGCGGTGCT GACGGCGGTC TACGCGCATC CGCACGCGGA CACCGACTCG
ATCGTCGGTT CCGTGCGCGA GGAGCTGCCT GAGGTGTCCC ACCAGGCGGT GTACGACTCG
CTGCGGGTTC TCACGACGGC CGGCCTGGTC CGGCGTATCC AGCCGGCCGG CTCGGCGGCC
CGTTACGAGT CGCGGGTGGG GGACAACCAC CATCACGTCG TGTGCCGGTC CTGTCGTGCC
ATCGCCGATG TCGACTGCGC GGTCGGCTCG GCGCCCTGCC TGGCCGCGTC CGACGACCGC
GGCTTCTCGA TAGACGAGGC CGAGGTCTTC TACTGGGGCC GGTGCCCCGA CTGCTCCCCG
CCGGCGACGC CTGACCGCCC CCGAGCCGCC CCTGACCGCT CCTGA
 
Protein sequence
MVAWLLSGFL DWFQKMGDHV VVATAEDFRR MLRGAALRVT RPRVAVLTAV YAHPHADTDS 
IVGSVREELP EVSHQAVYDS LRVLTTAGLV RRIQPAGSAA RYESRVGDNH HHVVCRSCRA
IADVDCAVGS APCLAASDDR GFSIDEAEVF YWGRCPDCSP PATPDRPRAA PDRS