Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1525 |
Symbol | |
ID | 5669929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1827331 |
End bp | 1828086 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641240445 |
Product | methyltransferase type 11 |
Protein accession | YP_001505871 |
Protein GI | 158313363 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0012912 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGTAC AACTCGACTG GGCAAAACGC GCCTACAGTG AGGACTACTT CCATTATATT TCGCCTCGCG CTGACGATCG GGAGACGGCG GATATGGTCC GTACTATCGG CGACCTCCTG GAACTGGAAC CGGGTGCGCG GATTCTTGAT CTGTGCTGCG GCGCGGGCCG GCATACCGTA ACCTTGGCGG ACCGAGGTTA CACCGTAGTT GGTGTTGACC GGAGTTTTGC CGGACTGGAA TTGGCGCGTG GCCAGATCAC ATTGAGAGCC ACTTCGGCGC AGGTCGTGTG TGCGGACGTG CGTAATTTAC CGTTCGGTAG AAACTTCGAC GCGGCCGTCA GCCTGTTTTC TTCTTTCGGT TACCTGCCCT CGGTAGCTGA GGATGCCGCT TTGGTTCGCG AGTTCTGCCG TGTACTTAGG CCCGGCGGCT ACTTCCTCCT TGACTTGGTG AATCCCATTC TCCCGATGTT TGGACGGGAA TCCCGAGTCT GGCGGCAAGC GCGCGGGCGG TTCGTACTTG AAGAGCGTTC CTATGATCCC GCTTCCGGTA TCAGCACGAG TGTGCGCACG GTGATCAGTG ACGGTTTCCG CCTTAAGCCG ATCGTGACGT ACATCAGGAT CTACACTCTC GCGGAACTCG CTCGTATTCT CGGCAACGCG GGTCTCTGCA TTTCCAAGGT CAGGGGTGAC TATCAGGGCG GGCCGTACGA CGCTATGACG TCGCCCCGAC TGATAGTCCT CGCGGTGCAG CCGTAG
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Protein sequence | MDVQLDWAKR AYSEDYFHYI SPRADDRETA DMVRTIGDLL ELEPGARILD LCCGAGRHTV TLADRGYTVV GVDRSFAGLE LARGQITLRA TSAQVVCADV RNLPFGRNFD AAVSLFSSFG YLPSVAEDAA LVREFCRVLR PGGYFLLDLV NPILPMFGRE SRVWRQARGR FVLEERSYDP ASGISTSVRT VISDGFRLKP IVTYIRIYTL AELARILGNA GLCISKVRGD YQGGPYDAMT SPRLIVLAVQ P
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