Gene Franean1_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1516 
Symbol 
ID5669920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1819669 
End bp1820154 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content71% 
IMG OID641240436 
Producthypothetical protein 
Protein accessionYP_001505862 
Protein GI158313354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000412772 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTCGCGC ACGCCCGGGC GCTGCTCACC AGCAGCCCCG AGGGCCGCAC GGCCTACGTG 
CACGGCGATG TCCGCCAGCC GGCCGAGATC CTCGCCAAGG CCGCCGAGAC CCTCGACTTC
ACCCAGCCGA TCGCCCTGAT GCTCATCGCG GTCATGCACT GCATTCCCGA CGAGGACGAT
CCGTACGCCA TCGTGCGCAC CCTGACGGAT GCGATGCCCC CCGGCAGCTA CTTCGTCCTC
ACCCATCCGA TCCCCGCGAC CGACGCACCG TCCGGCGACG TACCGGCCGA GGATCTGGCG
GCGGCGTACG CCCTGATGCG GGAGGCGTCC ACCGGCAGTT TCCACGCGCG GACAGCGGAT
CAGATCACCC GGTTCTTCGA CGGCTGGGAG CTCCTCGACC CCGGCGTCGT CCTCGCGACG
CAGTGGCGGG CGGACGAGCC CGAATCCACC GTGATCCGGG TCGGCATCGG CCACAGGACG
GCCTGA
 
Protein sequence
MLAHARALLT SSPEGRTAYV HGDVRQPAEI LAKAAETLDF TQPIALMLIA VMHCIPDEDD 
PYAIVRTLTD AMPPGSYFVL THPIPATDAP SGDVPAEDLA AAYALMREAS TGSFHARTAD
QITRFFDGWE LLDPGVVLAT QWRADEPEST VIRVGIGHRT A