| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1498 |
|---|
| Symbol | |
|---|
| ID | 5669902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1799809 |
|---|
| End bp | 1800510 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641240418 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001505844 |
|---|
| Protein GI | 158313336 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0699971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGCGG CCAACGGGGC GAGGCGGACC CAGGCGGAGC GGCGCGCGGC CTCCGAGGAG
GCGGTGCTGC GGGCCGCCGC CGAGCTGATC GCGGAGCGTG GGCTCGAGCG CGCGTCGCTG
CGCGGCATCG GCGCCCGCGC CGGGATCAGC CGTGCGATGC CCGCCTACCA CTTCGGGTCG
AAGGACGTCC TGATCACCCG GCTCGCCGAG CGGGCGCACG AACGGACGCT GGAGGCGACC
AGGGAGGCGC TCAGGCAGGC GCACCAACGC ATCGACGAGC TCTCCAGCCT CGAGGTGCTG
CGGGCGACCA TCGAGACCTA CCTCCAGGTC TTCACCACAG CGGATTCCCC GGAGGAACGC
GCCGTCGTCG TCCTGTGGGG CGCCACCTTT CCCACCGAGG CACCGCTACC GACCGTCCTC
GAGGCGGACC GGCAGACGCA CGACCAGCTT TCCGAGACGA TCCGCGCCGG CCAGCGGGAC
GGATCGATCC GGGACGACAT CGACGCCGAC GCCGCGGCCA CCATGATCAC GGGGATGGCC
CGCGGTGTCG CCGCGCTCTC GCTCACCCAA CCCGGCACCG CCGACCCGGA GCTGGTGCGG
ACCCTCTGCG GCGAAGCCAT CTCCGCCGTA CTCGGCACCC GCGGCGAAAC CTCCTCCCCA
GTCAAGGGAC CAGTGGGGGC GCCAGCGCGA GCTCAGCATT GA
|
|---|
| Protein sequence | MTAANGARRT QAERRAASEE AVLRAAAELI AERGLERASL RGIGARAGIS RAMPAYHFGS
KDVLITRLAE RAHERTLEAT REALRQAHQR IDELSSLEVL RATIETYLQV FTTADSPEER
AVVVLWGATF PTEAPLPTVL EADRQTHDQL SETIRAGQRD GSIRDDIDAD AAATMITGMA
RGVAALSLTQ PGTADPELVR TLCGEAISAV LGTRGETSSP VKGPVGAPAR AQH
|
|---|
| |