Gene Franean1_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1467 
Symbol 
ID5669871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1762693 
End bp1762977 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content65% 
IMG OID641240387 
Producttransposase, ISlxx5 
Protein accessionYP_001505813 
Protein GI158313305 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.499982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC ACGACGAGTT CACCGCTGCC ACCGGTGTCC CGGTCTACTT CTGCGAGCCC 
GCCAAACCCT GGCAACGCGG CTCGAACGAA AACACGAACG TGCTGCTGCG CCAGTACTTC
CCCGAGAGTA CCGACCTGTC CGTCCACACC GCGGCCGATC TGGCGGCCGT CGCTGCCGAA
CTCAACGCGC GGCCCCGCAA GATCCTCGGC TGGACGACTC CGGCGAGTCA GCTCGATAAG
CTCGTCGCAA CACTCGACCT CCCGGATGTT GCAATGATCG GCTGA
 
Protein sequence
MSRHDEFTAA TGVPVYFCEP AKPWQRGSNE NTNVLLRQYF PESTDLSVHT AADLAAVAAE 
LNARPRKILG WTTPASQLDK LVATLDLPDV AMIG