| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1401 |
|---|
| Symbol | |
|---|
| ID | 5669808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1697592 |
|---|
| End bp | 1698563 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641240326 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505753 |
|---|
| Protein GI | 158313245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCC CCAGCCTGCC ACTCGGCACC TACGGGAAAA TCACCGTCTA CCCCACCGGC
GCCCGGTACC GGGCGCGGTG CAAGTACCGC GACTTCGACG GCGTCACTCG CCAGGTGGAG
CGCTACGGGT CCACGTCGGC CGCCGCCGAG CGGGAGTTGA AGACCGCCCT TCGGGACCGC
GTCCACGTGT CCGGCTCGGA GGAGATCACG CCGGACACGA AGGTCGCCGT GGTCGCCGAG
CTGTGGTGGC TCGACTTCCA GAAGCAGGGC AAGTCGCCCG GCACCCTGCG GTCGTACCGG
GACCGGCTCG ACCGGCAGAT CCTCCCGGGG CTCGGGAACC TGCGGATCCG TGAGCTGACG
CCCGGGGCGA CGTCGCGGTT CCTCGGCGCC GTCGCGGAGA AGCACGGCGC CGGCATTGCG
AAGCTGTGCC GTGCCGTCCT CAACGGCGTG TCGACACTCG CGCTGAGGCA CGACGCCCTG
GACCGCTCCC CCGTCCGCGA CATCGGCAAG GTGGCCTCCA CCAAGCCGAG GAAGCAGGCG
CGGGCACTGT CCGTCGCCGA GGTGCGCCAG CTCCGCGCGT ACATCAGCTA TGACGCGACG
GCACGCAGCC GGGACCTTCC CGAGTTCGTG GACATGATGA TCGCGACGGG CTACGGATCG
GCGAGGCCTC CGCTGTGGTC TGGGACGCGG TCGACCTCGA CAAGGGCACC GTGGAAGTTC
GCGGCACGGT GGTCAGGCTC AAGGGCCAAG GGCTCGTCAT CAAGCCCGAA CCGAAGTCGA
GGGACGGTTT CCGGGTACTC GAACTCCCGG AGTGGTGCGT CAGGATGCTC AGGGCACGGC
GCGAGCGGTA TGGCTGGGCC GGGAGACAGG ATCCCGTTTC CCCGGCTCCG AAGGGCGTCG
GTCTCCGCGA TCCGGATAAC ACCCAGAAGC ATCTCGATGC CATGTTCGAG TTCGCAGGGG
TCGCGGACCT GA
|
|---|
| Protein sequence | MARPSLPLGT YGKITVYPTG ARYRARCKYR DFDGVTRQVE RYGSTSAAAE RELKTALRDR
VHVSGSEEIT PDTKVAVVAE LWWLDFQKQG KSPGTLRSYR DRLDRQILPG LGNLRIRELT
PGATSRFLGA VAEKHGAGIA KLCRAVLNGV STLALRHDAL DRSPVRDIGK VASTKPRKQA
RALSVAEVRQ LRAYISYDAT ARSRDLPEFV DMMIATGYGS ARPPLWSGTR STSTRAPWKF
AARWSGSRAK GSSSSPNRSR GTVSGYSNSR SGASGCSGHG ASGMAGPGDR IPFPRLRRAS
VSAIRITPRS ISMPCSSSQG SRT
|
|---|
| |