| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1340 |
|---|
| Symbol | |
|---|
| ID | 5669751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1612841 |
|---|
| End bp | 1614385 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641240271 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505698 |
|---|
| Protein GI | 158313190 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC CGCCGGTGTA CCGGCTTACC CGCCGCCGGT CCGGCGCGAC CCACTTCGGT
CTCGCCGGGG CACCGCTGGT GCTGGTCGCA GGGGGTTTCG CCGCGCTGGT TCTGCTTCCG
CTGCTGACCG ACAGCGTAGC GATCGGAGTC GTCGTGGCCG CTGCCTGCGG GCTGGCCGCG
TTCCTGCCGG TACCGGGCGG AGGGCCCGTC TACCAGGCTG TACCGCTTGC CATGCGGCAT
CTGGCCCGTC GGGTCGGAAG GCGGCACCAG TGGACCGCTT CGCTGCCCCT GCTCGCCGGC
GCTCCTGCCA CGGCGGAGAG CACGAGGGGC GAGGCCCGAC GGCTCCTACC GCCGCCGCTA
CGAGGTCTGG AGATCCTCAC CGTCCCCCGT GCTTCCGCGA CGGGCGCGAC GCGCAGCCTC
GCTCCCATCG CCCTGATCCA TGACCGGCGC GCCGGCACGC TCACCGCGGT GCTGTCCGCA
CGCGGCAGTG AGTTCGGGCT GCTCGAGCCT GCTGACCAGC ATCACCGGCT GTCCGCCTGG
GCGCAGGTCC TCTCCAACAC TGCCCGCGAC AGCGGCGTGG TGCGGCTGGG CTGGTCGCTG
TGGTCCGCTC CTGTCTCGCC GGCCGACCAT GTGCACTGGC TGAAGGACCG CCACCCTGAC
ACGGCCACGG CGGGCGTCGG GCACACCCGG GCGGCTGAGG ACTACCAGAC GCTGCTCGAG
AACGCCGCGG CGACGCTGAC CCGCCATGAC TTACGGCTGT GGCTGTCACT CGACACAGGC
CGGCTGCCCC GCCGCGCCGA CCCGACTGAC GCCGCGGCGC AGGCCGCGCT CACCCTGGCC
GAACGGTGCC GCGCCGCCGG CCTGGTCGTG GATGATCCCG ATTCGCCGGT GGGCGTCGCC
GAGGCGCTGC GTCTGCGCGC CGACCCGTCC GTGGCCGCCA CCCTCTCCAG AGTGCAGCGC
ACGCTCGCAC AGCAGATGGG CACCGCCAGC GTTATAGACG GCGTGCACGC CGGGCCGTTG
TCGATGCACG CGCAATGGGA CGCCGTGCGC ATCGACGACG TATGGCACCG GGTCTTCTGG
GTGTCACAGT GGCCGACGGC CGCCCTGCAC CCGGGCTGGC TCGACCCCCT GCTGTTCGAC
GTCTCCTGCG TCCGCACGGT GGCGCTCCTG CTGGAGCCGG TGTCCGCACG TGCCTCCCGC
CGGCGGATCA ACTCCGACGC CGTCGAGGTG GAGAGCCGGA TGGCGGTGCG GGAACGGCAC
GGTTTTCGGG TTCCGACCCA CCTGGCAGGG GCGCAGCAGC AGGTCGACGA ACGGGAAGCC
GAACTGCACG CCGGCCACGC CGAATACGGC TACCTCGCAC TCGTCGACAT CGCCGCGCCG
ACCCGCGGCG ACCTCGACGA CGCCAGCCGC CAGCTCGTCG ACGTGGCCGC GTTCGCCGGC
ATCAACGAAA TCCGCCCGCT ACACGGCCGC CACGACCTGG CCTGGGCCGC GACCCTACCC
ACCGGCAGAG CACCCGGCCG CGGGCTTCTC GGTGGATCCC CATGA
|
|---|
| Protein sequence | MIRPPVYRLT RRRSGATHFG LAGAPLVLVA GGFAALVLLP LLTDSVAIGV VVAAACGLAA
FLPVPGGGPV YQAVPLAMRH LARRVGRRHQ WTASLPLLAG APATAESTRG EARRLLPPPL
RGLEILTVPR ASATGATRSL APIALIHDRR AGTLTAVLSA RGSEFGLLEP ADQHHRLSAW
AQVLSNTARD SGVVRLGWSL WSAPVSPADH VHWLKDRHPD TATAGVGHTR AAEDYQTLLE
NAAATLTRHD LRLWLSLDTG RLPRRADPTD AAAQAALTLA ERCRAAGLVV DDPDSPVGVA
EALRLRADPS VAATLSRVQR TLAQQMGTAS VIDGVHAGPL SMHAQWDAVR IDDVWHRVFW
VSQWPTAALH PGWLDPLLFD VSCVRTVALL LEPVSARASR RRINSDAVEV ESRMAVRERH
GFRVPTHLAG AQQQVDEREA ELHAGHAEYG YLALVDIAAP TRGDLDDASR QLVDVAAFAG
INEIRPLHGR HDLAWAATLP TGRAPGRGLL GGSP
|
|---|
| |