Gene Franean1_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1269 
Symbol 
ID5669682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1526935 
End bp1527825 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content74% 
IMG OID641240201 
Productacetyltransferase 
Protein accessionYP_001505629 
Protein GI158313121 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.83932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.337234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATAG TAATCGAGTT GCGGGAAACG GTCGGCGATA CGGCGCATCC CGGGGCGGCA 
CACCCTCCGG CCAGGCGACA CCACCCGACG GGATCGACTA CTCAGAGTGT CCGATTGAAC
GGGCGCCGTC ATCGCTCTAC GGTCGGCCCC GTGCCAGACC TCGGACGCCA GCTCGTCATC
GTGGGAGCCG GCGGCCACGG CCGCGAGCTC CTCGACCTCG TCGAGGCGGT CAACGCCGCC
AGCGACCGGG ACATCTACCG GTTCCTCGGG TTCCTCGACG ACGGCGAGGT CGATCCCGAC
CCGCTCGCCC GGCGCGGGAG CACCGTGCTG GGCGGGCTCG ACCTGCTGGC CAGCCTCGAG
GCCGACTACC TGATCGGCGT CGGCGCAGCG GCCTCACGGG CCCGCATCGA CCGGTACGCC
AGCGCGTGCG GACGGCGCCC GGCCACGATC GTCCATCCCC GCGCCCACCT GGGCGGCGAC
GTGAAGCTCG GGCCGGGCAC CGTGGTCTGC GCGTTCGCGA GCCTCACCAC CAACATCGAG
ACGGGCCGGC ACGTCCTGGT GAACATCGGC GCCGGCATCG CGCACGACTG CCGCCTCGGC
GACTACGCGA CGCTCGCCCC CGGCGCCCGG ATCGGCGGTG CCGTCGAGGT CGGCCCCGGC
GCCTGGGTGG GGATGCAGGC CAGCGTCGTG CGGAGCCGGC GGATCGGTGC CGGGGCGGTG
GTCGGCGCCG GGGCGGTCGT CACCGGCGAC GTGCGCCCCG GACTCGTCGT GGCCGGGGTG
CCGGCCCGCC CGATCGACCC GTCCGACGCC GGTGCGGACG CCGCCCGGCC ACCGATAGTG
GAACCGAGGA CGCCCGAACC CCAGTCCGGG GCACCCCGAG CCGACCTATG A
 
Protein sequence
MLIVIELRET VGDTAHPGAA HPPARRHHPT GSTTQSVRLN GRRHRSTVGP VPDLGRQLVI 
VGAGGHGREL LDLVEAVNAA SDRDIYRFLG FLDDGEVDPD PLARRGSTVL GGLDLLASLE
ADYLIGVGAA ASRARIDRYA SACGRRPATI VHPRAHLGGD VKLGPGTVVC AFASLTTNIE
TGRHVLVNIG AGIAHDCRLG DYATLAPGAR IGGAVEVGPG AWVGMQASVV RSRRIGAGAV
VGAGAVVTGD VRPGLVVAGV PARPIDPSDA GADAARPPIV EPRTPEPQSG APRADL