Gene Franean1_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1261 
Symbol 
ID5669674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1518524 
End bp1519993 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content74% 
IMG OID641240193 
Productpropionyl-CoA carboxylase 
Protein accessionYP_001505621 
Protein GI158313113 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.38821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0660561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCAC CGGGGCCGCC ATCTGCGCAG GAGCAGGCTG ATACCGCTCA ACCAAGGAGA 
CCTACGGTGA GTCTGTCCAC CATCGACCGC ACCGATTCCC GAACTCCCGT CTCGCGGCTG
AGCCGCTTCT TCGACCCGGA CACGCTCTCG CTGTTCGCCT CCGCCGACGG TTCGGGTGTC
GTGGCCGGCC AGGGCCTCGT CGACGGCAAC GAGGTCGTCG CCTTCGCCAC CGACCCCACG
GTCCAGGGCG GCGCGATGGG CCGGGACGGC TGCGCGCGCA TCGTGCACGC GATCGAGTCG
GCCGTCCGGA TGAGCTGCCC CGTGATCGGT ATCTGGCACT CCGGGGGCGC CCGCCTGCAG
GAGGGTGTGG CCTCGCTCGA CGGCGTCGGC CGGGTGTTCG CGGCGACGGT CCGCGCCTCG
GGACGGGTGC CACAGATCTC GCTGGTCCTC GGGGCCGCGG CCGGCGGCGC CGCCTACGGC
CCGGCGCTCA CCGACCTGGT CATCACCGGG CCCGACGCGA AGGTCTTCGT CACCGGCCCG
GACGTCGTCC GCTCGGTGAC CGGCGAGGAG TGCACGGCCG ACAGCCTCGG CGGCCCCGAG
GTCCACTCGA CCCGCAGCGG AGTCGTCCAC CTCGCCTGCG ACACCGACGA CGCCGCGTTC
GACCGGACCC GCGCGATCAC CGCGCTGCTG GCCGACCAGG GCTCCATCGG CCACGTCGCC
GAGCGTGAGC TCGGCGATCT GCTGCCGGAG AACCCCCGCC GCGCCTACGA CGTGCGGCCG
CTCGTCGCCG GCCTGCTCGA CGACGAGGTC GTCGAGCTGC ACCCCAAGTG GGCGCGCAAC
ATCGTCACGG CCCTCGGCCG CCTCGGCGGG CGGACGGTCG GCGTGGTGGC GAACAACCCG
CTGCGCCGCG GTGGCTGCCT CGACGCGCTC TCGGCGGAGA AGGCCTCGCG GTTCGTGCGG
ATGTGCGACT CGTTCGGGAT CCCGCTCGTG GTGCTCGTCG ACGTCCCCGG CTACCTGCCC
GGCGTGGGCC AGGAGTGGGA GGGTGTGGTC CGGCGCGGCG CGAAACTGCT CTACGCCTTC
TCCGAGTGCA CCGTGCCCCG GGTCACCGTC GTCACCCGCA AGGCCTACGG CGGCGCGTAC
ATCGCGATGA ACGCCCGCTG CCTGGGCGCG ACCGCGGTCT ACGCGTGGCC TACCGCGCAG
CTCGCGGTCA TGGGGGCGGA GGCCGCGGTC GGCATCCTGC ACCGCCGGCA GCTGGCCGAG
GTGCCCGCCC AGCGCCGCCC GGACGTGATG GCCGAGCTGG CCGAGGAGCA CGTCCGCACC
GTCGGCGGGA TCGACCGCGC GGTGGAGCTG GGCGTGGTGG ACGCGGTCGT CACACCCGCG
ACGACCCGCG GGGCGGTCGC GGCCGCGCTC GCCGACGCGG TCGCCGCGGC CCGGGTGGAC
AAGAACGTTC ACGGCAACAT CCCTCTGTAG
 
Protein sequence
MAAPGPPSAQ EQADTAQPRR PTVSLSTIDR TDSRTPVSRL SRFFDPDTLS LFASADGSGV 
VAGQGLVDGN EVVAFATDPT VQGGAMGRDG CARIVHAIES AVRMSCPVIG IWHSGGARLQ
EGVASLDGVG RVFAATVRAS GRVPQISLVL GAAAGGAAYG PALTDLVITG PDAKVFVTGP
DVVRSVTGEE CTADSLGGPE VHSTRSGVVH LACDTDDAAF DRTRAITALL ADQGSIGHVA
ERELGDLLPE NPRRAYDVRP LVAGLLDDEV VELHPKWARN IVTALGRLGG RTVGVVANNP
LRRGGCLDAL SAEKASRFVR MCDSFGIPLV VLVDVPGYLP GVGQEWEGVV RRGAKLLYAF
SECTVPRVTV VTRKAYGGAY IAMNARCLGA TAVYAWPTAQ LAVMGAEAAV GILHRRQLAE
VPAQRRPDVM AELAEEHVRT VGGIDRAVEL GVVDAVVTPA TTRGAVAAAL ADAVAAARVD
KNVHGNIPL