Gene Franean1_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1252 
Symbol 
ID5669665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1509175 
End bp1510020 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content74% 
IMG OID641240184 
Productpolyphosphate--glucose phosphotransferase 
Protein accessionYP_001505612 
Protein GI158313104 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000375629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0353997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAGG ACGGCGCAAT GCGGGTCTTC GGGGTCGACA TCGGTGGGAC GGGCATCAAG 
GGCGCCCCGG TCGACATCGA GGATGGCACG CTGGCTGCGC CGCGGTTCCG GCTCCCGACG
CCGCAGCCCG CGGACCCGGA GTCGGTCGCG CGGACCGTCG CGGAGGTCGT CGCGCACTTC
GAGTGGACGG GCCCGGTCGG CGCCACGTTC CCGGCGGTGA TCAAGTCCGG GGTCGCCCGC
ACCGCCGCGA ACGTCGACGA GGCCTGGATC GACACCGACG TCTCCGCGGT GCTCGGCGGG
GCACTCGGGC CGGCGCTGGC CGGCTCGGAG GTCGCCGTCG TCAACGACGC CGACGCCGCC
GGGGTGGCCG AGATGGCGTT CGGCGCCGGC CGTGACACCT CCGGCCTCGT CGTCATGACG
ACGTTCGGCA CCGGGATCGG GACGGCGCTG TTCCTGCACG GCCAGCTCGT ACCGAACACC
GAGCTGGGGC ACCTGGAGAT CCAAGGCCAC GACGCGGAGA CGCGGGCGTC CGAGGCCGTC
CGGGAGCGTG AGGATCTCTC CTGGGAGAAG TGGGCCAAGC GGGTCAACCG CTACCTGAGC
ACCCTCGAGG CCCTGTTGTG GCCGGATCTG ATCATCATCG GCGGCGGCGC CAGCCGGAAG
GCGGAGAAGT TCTTCGACCA CCTCGAACTG CGCACGAAGG TGGTGCCCGC CCAGCTCCAG
AACGAGGCGG GCGTCGTCGG GGCGGCGCTG TACGCCGGCG GTGACCAGAC CCGCGCCCGG
CCCGCACCGC GCCCGGCGCG CCGGCGCGGG CCGGCGACCC GGCCGCCCGG CGGCCGTCGC
CCCTGA
 
Protein sequence
MREDGAMRVF GVDIGGTGIK GAPVDIEDGT LAAPRFRLPT PQPADPESVA RTVAEVVAHF 
EWTGPVGATF PAVIKSGVAR TAANVDEAWI DTDVSAVLGG ALGPALAGSE VAVVNDADAA
GVAEMAFGAG RDTSGLVVMT TFGTGIGTAL FLHGQLVPNT ELGHLEIQGH DAETRASEAV
REREDLSWEK WAKRVNRYLS TLEALLWPDL IIIGGGASRK AEKFFDHLEL RTKVVPAQLQ
NEAGVVGAAL YAGGDQTRAR PAPRPARRRG PATRPPGGRR P