Gene Franean1_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1242 
Symbol 
ID5669655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1495813 
End bp1496733 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content75% 
IMG OID641240174 
ProductABC transporter related 
Protein accessionYP_001505602 
Protein GI158313094 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.151722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00610054 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGTGTGC TCCGGTGGGG GCGCGGTGGT GCGTTCGCGC CGGCAGGTCC ACCCGCCTCC 
GGCCGGGGTC GCGTCTCGCG TAACGTGAGC GCCATGCCGG ACGCGGTGCT GCGCCTCGAC
AAGGTCACGG TCAGGCGCGA CGGGGTTGAC CTGTTGCGGG ACGTGAGCTG GGTGGTGAAC
CAGGGCGAGC GCTGGGTGGT GCTCGGGCCG AACGGCGCGG GCAAGACCAC CCTGCTGCAG
ATCGCCTCCT CCCGCCTGTT CCCCACCGCC GGCGCGGTCG ATCTTCTCGG CGCGCGCCTG
GGCCGGGTGA ACCTGCATGA CCTGCGTTAC CGGGTCGGCG TCGTCAGTCC GGTGCTCACC
GACGCGCCGC CGCCCGGCGA GCGGGTCCTC GACGCCGTCG TCACCGCCGG CTGGTCCGTG
CTGGGCCGCG CCGACGAGGC GTACGACGAC GTCGACCTGC GCCGTGCCGC GGACCTGCTC
GGCCAGTTCG GCTGCCGGGG CCTGGTCGAG CGCACCTTCG GCACGCTGTC GGAGGGGGAG
CGTAAGCGGG TCCAGATCGC CCGGGCGCTG ATGACCGACC CCGAGCTCCT GCTGCTGGAC
GAGCCGGCCG GCGGGTTGGA CCTCGGCGCG CGGGAGGCCC TGCTGCGGCT GCTGACCCGG
TTCGCAGCCG ATCCGGTCGC CCCGGTCACC GTGCTGGTCA GCCATCACGT CGAGGAGATC
CCGGTCGGCG TGACGCACGC GCTTCTGCTG CGCCGCGGCC AGGTACTCGC CGCCGGGCCG
GTGGCGGAGG TCATGCTCTC CGAACGGCTC TCGGCCTGTT TCGGGATTCC GCTGGAGATA
ACGTCCTCGG CGGGCCGGTA CGCGGCCCGC CTGGCGGCTC CGGCCCCCCG GCCGCGCCCG
CCGGCTCCGG CGCCGGCCTG A
 
Protein sequence
MGVLRWGRGG AFAPAGPPAS GRGRVSRNVS AMPDAVLRLD KVTVRRDGVD LLRDVSWVVN 
QGERWVVLGP NGAGKTTLLQ IASSRLFPTA GAVDLLGARL GRVNLHDLRY RVGVVSPVLT
DAPPPGERVL DAVVTAGWSV LGRADEAYDD VDLRRAADLL GQFGCRGLVE RTFGTLSEGE
RKRVQIARAL MTDPELLLLD EPAGGLDLGA REALLRLLTR FAADPVAPVT VLVSHHVEEI
PVGVTHALLL RRGQVLAAGP VAEVMLSERL SACFGIPLEI TSSAGRYAAR LAAPAPRPRP
PAPAPA