| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1216 |
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| Symbol | |
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| ID | 5669629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1451315 |
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| End bp | 1452703 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240148 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001505576 |
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| Protein GI | 158313068 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0290926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0453765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGG CGCGAGAGGA GCCCGGCCGC GTACCCACCC CGTGGGACCC GAGCCTGCGC
GGCCTGACGA TCGGCCTCGT CAGCACCGTC ACGCTGATCG CCTTCGAGGC GATGGCGGTC
GTCACCGTGC TGCCGGAGGT CGCCGCCGAC CTGTCCGGAC TGTCCCTGTA CGGCTGGACG
ACCAGCGGGT TCTTCCTCGG CCTGCTCGTC GGGGTGGTGA TCGCCGGGGC GGAGACGGAC
CGCGTCGGCG CGGTGCGCCC GTTCACCGTC GGGCTGTCGC TGTTCGCCGC CGGCTTAGCC
GTGGCCGCCC TCGCGCCGAC CATGGAGATC CTGGTGGCCG GCCGCATCCT GCAGGGCCTC
GGCGGCGGCG CGGTACCCGC CGTGCTGTAC GCGACGATCG GGCGCGCCTA CCCGGAGTCG
CAGCGGCCCA GGATGTTCGC GGTGACGTCC ACCGCCTGGG TGGTGCCCGG GCTGGTCGGA
CCGGTGACCT CGGCGCTCGT CGCCGAGCAC GCCGGCTGGC GGTGGGTCTT CGGCGGGCTG
CTCCCGCTGG TGCTGGTGGC CGGGGCGCTC ACGGTCCGCG CGCTGGGCGG GCTGGGGCCG
CCGCCGACCG CGCCCACCGG CGGGGCGGCG CGGCGTTTCG TCGCCGCGAT CAGGGTGAGC
GTCGGTGCCG GCCTCATCCT CGTCGGGCTG ACGAGCCGGT CGCCGCTGGG GATCGCGCCG
GTTCTCGCCG GGGGGCTGCT CGCCTACCAG CCGCTGCGCG TCCTGCTCCC GGAGGGAACG
CTGCGTGCAC GTCCCGGCAT CGCGGCGGCG GTGGCCGCCC GCGGGCTGCT GACCTTCGCC
TTCTTCGGCG CCGACACCTT CGTCCCGCTG GCCGTCACGG CGGCGCGCGG GCAGTCCACG
ACGGTCGCCG GCACCGCGGT CACCGTCGCG ACCGTGACCT GGACAACAGG CTCCTGGACG
CAGGCGCGGC TGGCCGGGCG CTACCCGGGG CGGGAGCTGA TCCGCTCCGG CCTGCTCCTG
GTGGCGGCCG GCACGGCGGG CTTCGCCCTG GTCCTGATGG ACGGCGTCCC GCTGGCGGTG
CCGATCGCCT GCTGGGGGCT CGCCGGGCTC GGGATGGGCC TGGCGTATTC GCCGGTGGTG
AGTCTGGTCC TCGCCGAGAC GCCGCCGGAG CGGCACGGCA CGGCGTCCAG CTCGGTGACC
CTCTCGGACA ACCTCGGAAC GGCGTTCGGG ACAGGTCTTG GCGGAGTGGC CGTCGCTGCC
AGCGAAGCCT CCGCCGGGAC GCCCTCAGCC GGGCTGGGTG TGGTCTTCGC CCTGACTGCG
GTCGTCGCCG TGCTGGGCGC CACCGTCATC CGCCGGGCCC CGTCCAGGAC GTTCCCCACT
GTGTCCTGA
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| Protein sequence | MTTAREEPGR VPTPWDPSLR GLTIGLVSTV TLIAFEAMAV VTVLPEVAAD LSGLSLYGWT
TSGFFLGLLV GVVIAGAETD RVGAVRPFTV GLSLFAAGLA VAALAPTMEI LVAGRILQGL
GGGAVPAVLY ATIGRAYPES QRPRMFAVTS TAWVVPGLVG PVTSALVAEH AGWRWVFGGL
LPLVLVAGAL TVRALGGLGP PPTAPTGGAA RRFVAAIRVS VGAGLILVGL TSRSPLGIAP
VLAGGLLAYQ PLRVLLPEGT LRARPGIAAA VAARGLLTFA FFGADTFVPL AVTAARGQST
TVAGTAVTVA TVTWTTGSWT QARLAGRYPG RELIRSGLLL VAAGTAGFAL VLMDGVPLAV
PIACWGLAGL GMGLAYSPVV SLVLAETPPE RHGTASSSVT LSDNLGTAFG TGLGGVAVAA
SEASAGTPSA GLGVVFALTA VVAVLGATVI RRAPSRTFPT VS
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