Gene Franean1_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1201 
Symbol 
ID5669614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1435007 
End bp1435405 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content75% 
IMG OID641240133 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001505561 
Protein GI158313053 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.695362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.347702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGG AGGACATGCG GGAACCGACG TTCCTGGTGC TCGCCGCGCT GGCTGACGGC 
CCGCGCCACG GGTACGCGGT GATCCGCGAG GTCACGGACA TCTCCGGCGG TCGGGTGACC
ATGCGGCCGG GCACGCTCTA CGGCGCTCTG GACCGCCTCG CCGGCGAGGG CCTCGTGCGG
GTCGAACGCG AGGAGGTCGT CAACGGGCGG CTGCGGCGGT ACTACTCGCT GACCGATGAC
GGGGCGGGCG CGCTCACGGA GCAGACCGAG CGGCTGCGGG CCAACGTCGC CGAGGCTGAC
CGCAGGCTGC GCCTGCGCGT CCGGCCCGCC ACCGGCCCGG CGACGGCGTT CGCCCGGGTG
ACCAGGCTGG CGCCCCCGAG CGTGCCGGCG ATCGGCTGA
 
Protein sequence
MAMEDMREPT FLVLAALADG PRHGYAVIRE VTDISGGRVT MRPGTLYGAL DRLAGEGLVR 
VEREEVVNGR LRRYYSLTDD GAGALTEQTE RLRANVAEAD RRLRLRVRPA TGPATAFARV
TRLAPPSVPA IG