Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1190 |
Symbol | |
ID | 5669603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1415793 |
End bp | 1417226 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641240122 |
Product | peptidase M16 domain-containing protein |
Protein accession | YP_001505550 |
Protein GI | 158313042 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0547363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.134748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGAGA CGGATCTGTC CACCTCGGAC GACCGCACCT CGGACGGTCG CACCTCGAAC GACCGCACCC CGGGCCTGGC CGGGCCGGAG CACGCCTCCG GCCCGCGCCC GGCCCGGGTG GCCGAGCTTC TCGCGGCGGG TCCCGGTTCC GAGGTCCTGC TCGCCGGGGC CGTGCGCCGC ACGGTGCTGC CGGGCGGCCT GCGGGTCGTC ACGGAGAAGG TCCCCGGGGT CCGGTCGGTG GCGATCGGGA TCTGGGTGGG CGTCGGCTCG CGGGACGAGA CGCCGCTCAC CGGTGGCTGC TCGCACTACC TGGAGCACCT GCTGTTCAAG GGCACCCCGA GCCGGGACGC CCTGTCGATC AGCGCCTCCA TCGAGGCCGT CGGCGGTGAT CTCAACGCCT TCACCGCCAA GGAGTACACC TGCTACTACG CGCGGGTGCT CGACGTGGAC ATGGACCTGG CCATCGACGT CGTCTGTGAC ATGGTCGCCA ACTCGCTGGT GACCGCGGAC GACGTCGAGG CCGAGCGGGG CGTGATCCTC GAGGAGATCG CCATGCACGA GGACGACCCC GGCGACGTCG TGCACGACGT CTTCGCCGAC GCCGTCCTCG GCTCCTCCGT CCTGGGGCGA CCGGTGCTCG GCACGGTCGA CACCATCGAG GCGCTCGGCC GGGAGACGGT CTTCGACTAC TACCGCGAGC GGTACGCCCC GCCCGCGCTG GTCGTCTCGA TCGCCGGCAA CATCGAGCAC GACCACGCCC TGGACCGGGT GGTGGCCGCG TTCGCCGACC GGCTCACCGG GCCCGCCCGG CACCAGGAGG TGCGCCGCGG CGAGTACCCG TTCCCGCCGC CGCCGGGCAT CGTCGTCACC AACCGGCCGA CCGAGCAGGC CCACGTGGTG CTCGGCACGG CCGGCCTGTC CCGGCACGAC CCGCGCCGGT ACGCGCTCGG CGTGCTGTCG ACGGCCCTCG GTGGCGGGAT GAGCTCGCGG CTGTTCCAGG AGGTGCGGGA GAAGCGCGGG CTGGCCTACT CCGTGTACTC CTTCGACAAC CAGTTCGCCG ACGCCGGGCT GTTCGGCGTC TACGCGGGCT GTACCCCGGG GCGCGCCGAC GAGGTGCTGG AGATCTGCCG CGAGCAGGTG CACCGGATCG CCGAGCACGG CATCACCGCG GAGGAGCTCG AGCGGGCCCG CGGCCAGAAC CGCGGCGGCC TGGTGCTCAA CCTGGAGGAC ACCGGGTCGC GGATGAGCCG GCTCGGCAAG AGCGAGCTCG TCCACGGCGA GCTGCTCTCG GTCGACGAGG TGCTCGCCCG GGTCGAGGCC GTCACACTCG ACGACGTGCG GGCCGTCGCC GGCGAGCTGG TCGACCAGCC GTGGGCGCTC GGCGTCATCG GCCCGTTCGA GGACCACGAC TTCAGCGCGG CCGTAGCGCG GTGA
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Protein sequence | MTETDLSTSD DRTSDGRTSN DRTPGLAGPE HASGPRPARV AELLAAGPGS EVLLAGAVRR TVLPGGLRVV TEKVPGVRSV AIGIWVGVGS RDETPLTGGC SHYLEHLLFK GTPSRDALSI SASIEAVGGD LNAFTAKEYT CYYARVLDVD MDLAIDVVCD MVANSLVTAD DVEAERGVIL EEIAMHEDDP GDVVHDVFAD AVLGSSVLGR PVLGTVDTIE ALGRETVFDY YRERYAPPAL VVSIAGNIEH DHALDRVVAA FADRLTGPAR HQEVRRGEYP FPPPPGIVVT NRPTEQAHVV LGTAGLSRHD PRRYALGVLS TALGGGMSSR LFQEVREKRG LAYSVYSFDN QFADAGLFGV YAGCTPGRAD EVLEICREQV HRIAEHGITA EELERARGQN RGGLVLNLED TGSRMSRLGK SELVHGELLS VDEVLARVEA VTLDDVRAVA GELVDQPWAL GVIGPFEDHD FSAAVAR
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