| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1082 |
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| Symbol | |
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| ID | 5669496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1288647 |
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| End bp | 1290758 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240014 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001505444 |
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| Protein GI | 158312936 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.12807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTGG ACGAGCGCGG CCTGGCTGCC GACGAGCGCG GCCTGGCCGC TGACGAGGTT
GGTCTGGCCG CCGACGAGCG TGGCCGGGCC GCCGAGCTGG CCCGCGAGCT GGAGGAACAC
GCCTACCGCT ACTACGTGCT CGACAAGCCG ACCGTCGCCG ATGCCGAGTA CGACGCGCTT
ATGCGCGAGC TGGAGGCGAT CGAGGAGCGG CACCCCGAGC TGCGCACCCC GGACTCGCCG
ACCCAGAAGG TCGCAGGCTC CTACTCGACG CTGTTCACCC CGGTCGAGCA TCTGGAACGG
CTGCTGTCAC TCGACAACGT CTTCACCGAC GAGGAGTTCC ACGCCTGGGC GGCGCGCGCC
GCGCGGGAGC AGCCTGTCAC GGCGTGGCTG TGCGAGCTGA AGATCGACGG GCTGGCGGTC
GACCTCGTCT ACGAGGGCGG CCGGCTCGTC CGCGCGGCCA CCCGCGGCGA CGGTCGCACG
GGGGAGGACA TCACGCCCAA CGTGCGGACC CTGGCGAGCG TGCCGTCCCG GCTGCGCGGC
CCGGCCGTGC CGGAGCTGCT CGAGGTGCGC GGCGAGGTGT TCTTCCCGAC CGAGCGGTTC
ACCGAGCTCA ACGCCGCGCT GGTTGAGGCG GGGAAGGCAC CGTTCGCCAA CCCGCGCAAC
GCCGCCGCCG GGTCGCTGCG CCAGAAGGAC CCCCGGGTCA CCGCCAGCCG TCCGCTCGAC
ATGATCGTGC ACGGCCTCGG CGCCCACCAG GGCTTCGACG TGGCGTCCCA GTCGGGCGCG
TACGCGCGGC TCGCCGAGCT GGGGCTGCCG GTCTCCGCCC GTCACGAGGT GCTGGCCTCG
GTGGAGGACG TGCTCGCCTT CGTCCGGCGC TGGGGCGAGC ACCGCCACGA CGTCGAGCAC
GAGATCGACG GGGTCGTCGT GAAGGTCGAC GACTTCGGCC AGCAGCGTCG CCTCGGCGCC
ACCTCGAAGG CCCCCCGCTG GGCGGTCGCG TTCAAGTACC CGCCGGAGGA GGTCACCACC
CGGCTGCGCG ACATCCAGGT GAACGTCGGC CGCACCGGCC GGGTGACCCC GTTCGGGGTG
CTCGAGCCGG TGAAGGTGGC GGGGTCGACG GTGGCGATGG CCACCCTCCA CAACATCGAC
GAGGTGGGTC GCAAAGGCGT CCTGATCGGC GACACCGTGG TGCTGCGCAA GGCCGGCGAC
GTCATCCCCG AGATCGTCAG CCCGGTCGTC GACCTGCGTG ACGGTTCCGA GCGCGCGTTC
GTGATGCCCA CGCACTGCCC GGAGTGCGGC ACCCAGCTGG TCCGCCCCGA GGGCGAGGTC
GACATCCGCT GCCCGAACAC CGTCTCGTGC CCGGCGCAGC TGCGGGAGTC GGTGTTCCAC
CTGGCATCGC GCGGCGCGCT CGACATCGAC GGGCTCGGTT ACGAGACGGC GACGGTCCTG
CTCGCGGAGG GCCGGATCCA CGACATCGGC GACGTCTTCC ACCTGGCCCC GGAGTCCTTC
GAGGGGCTGC GTGGCTTCGC CGACAAGAAG ATCGAGCAGA TCCTGCGCGG CCTGGAGGCG
GCTCGCGACC GCCCGCTGTG GCGGTTGCTG GTCGGGCTGT CGATCCGTCA CGTCGGGCCG
ACGGCCGCCC GCGGGCTGGC CCGGGAGCTG CGTTCCCTCG ACGCGATCGC GACGGCGCCC
GCCGAGCGGC TCGCGGCCGT CGACGGCGTC GGGCCGAAGA TCGCCGACGC GGTGGTCGAC
TGGTTCGCCG ACCCGCGGCA CCGCGACATC GTCGCCCGGA TCGCCTCGGG CGGGGTCCGC
CTGGCCGACG AGGGCGCCGG CGAGGGCCCC GGGCCGCTGG ACGGCGTCGT GGTGGTCATC
ACCGGCACCC TGGACGGCTG GAGTCGGGAC ACGGCGACCG AGGCGGTGCA GTCCCGCGGC
GGCAAGGTGA CGGGCTCGGT GAGCAAGAAG ACGACGTTCG TCGTCGCCGG CGCCGATCCC
GGGGCGTCGA AGTACGACAA GGCCCGCACC CTGAAGATCC CGCTCCTGGA CGAAGCCGGA
TTCGCGGTGC TTCTCCGTGA CGGAGCGGAT GCGGCCAGGG CACTCGCCGT GCCCGAGGAG
GTCGACGGGT AA
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| Protein sequence | MSVDERGLAA DERGLAADEV GLAADERGRA AELARELEEH AYRYYVLDKP TVADAEYDAL
MRELEAIEER HPELRTPDSP TQKVAGSYST LFTPVEHLER LLSLDNVFTD EEFHAWAARA
AREQPVTAWL CELKIDGLAV DLVYEGGRLV RAATRGDGRT GEDITPNVRT LASVPSRLRG
PAVPELLEVR GEVFFPTERF TELNAALVEA GKAPFANPRN AAAGSLRQKD PRVTASRPLD
MIVHGLGAHQ GFDVASQSGA YARLAELGLP VSARHEVLAS VEDVLAFVRR WGEHRHDVEH
EIDGVVVKVD DFGQQRRLGA TSKAPRWAVA FKYPPEEVTT RLRDIQVNVG RTGRVTPFGV
LEPVKVAGST VAMATLHNID EVGRKGVLIG DTVVLRKAGD VIPEIVSPVV DLRDGSERAF
VMPTHCPECG TQLVRPEGEV DIRCPNTVSC PAQLRESVFH LASRGALDID GLGYETATVL
LAEGRIHDIG DVFHLAPESF EGLRGFADKK IEQILRGLEA ARDRPLWRLL VGLSIRHVGP
TAARGLAREL RSLDAIATAP AERLAAVDGV GPKIADAVVD WFADPRHRDI VARIASGGVR
LADEGAGEGP GPLDGVVVVI TGTLDGWSRD TATEAVQSRG GKVTGSVSKK TTFVVAGADP
GASKYDKART LKIPLLDEAG FAVLLRDGAD AARALAVPEE VDG
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