Gene Franean1_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1038 
Symbol 
ID5669452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1218779 
End bp1219294 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content74% 
IMG OID641239967 
Producthypothetical protein 
Protein accessionYP_001505400 
Protein GI158312892 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG TGGACAAGGA CGCGCTGCGC GCATTCGGCC GTGAGGTGAC GACCTTCCTG 
CCCGACCTGG TCGTGATGCT GCGCCGGGTG GTCGCCGACC CGCGGGTGCC GCAGTCCGCG
AAGCTGGAGG CGGGAGCGGC GCTGGCCTAC CTGGTGTCGC CGAAGAACCG GCTGACGAAC
ATCATCCCGG TGATCGGCCA GCTCGATGAC GTGGCCGTTG TGGCCTTCGC GTTCCGTCGC
CTGGTGGTCG GGGCGGGTGA GCCGATCCTG CGGGAGCACT GGCGCGGCAG CGACCGCTCG
TTCCACGCGC TCATCGGGGC GTCGTCGGCG CTGGCGAGCC CGGCGGGCAT GCTCCGGCGG
GCGAAGGTGG CCCGTACGCT GGCCGGCGCG GCGATCCACA GGGTCGGCCG CGGCGGGCGG
GCGGGCGACG CCGGCGCGGA GCCGAGAACC GTCAAGGTCG TGGACGGCGA GGTCATCGGC
CGTTCAGGGC CGGACGGCGG CTCCGGCGGT CACTGA
 
Protein sequence
MATVDKDALR AFGREVTTFL PDLVVMLRRV VADPRVPQSA KLEAGAALAY LVSPKNRLTN 
IIPVIGQLDD VAVVAFAFRR LVVGAGEPIL REHWRGSDRS FHALIGASSA LASPAGMLRR
AKVARTLAGA AIHRVGRGGR AGDAGAEPRT VKVVDGEVIG RSGPDGGSGG H