Gene Franean1_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1029 
Symbol 
ID5669443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1208987 
End bp1209370 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content70% 
IMG OID641239958 
ProductNUDIX hydrolase 
Protein accessionYP_001505391 
Protein GI158312883 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCCG TAAGCGTAAC CGCCGTGACA CGCAGAGATG ACGGTCGCGT GCTCTGCATT 
CAGCGGCGGG ACACCGGCGC GTGGCAGATT CCGGGCGGAG TCCTCGAGCG TGGTGAGACC
TTCGAAGACG GGCTTCGCCG CGAGGTGCGG GAGGAGACCG GGGCGCTCGT GATCAGCTCC
CAGACCGACG AGTCCGTGGC GGTCGACTGG CTCACCGTGG ACGAGGTCGT CCGGCGGTCG
GTGCCCGCGT TCGCCGTGCG GGTCACCGAC GCGCTCGCCG GCCAGCCGGA GCCTTTCCTG
CGTCACCACG ACGGAGTGCG CGTGCTGGAC GTCGCCGGTT CGCCCGGTGT TGCTGTGGAC
TCCGTCTCGG CGCCGGATGC ATAG
 
Protein sequence
MHSVSVTAVT RRDDGRVLCI QRRDTGAWQI PGGVLERGET FEDGLRREVR EETGALVISS 
QTDESVAVDW LTVDEVVRRS VPAFAVRVTD ALAGQPEPFL RHHDGVRVLD VAGSPGVAVD
SVSAPDA