Gene Franean1_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1023 
Symbol 
ID5669437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1203528 
End bp1204424 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content71% 
IMG OID641239952 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_001505385 
Protein GI158312877 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCC AGCTTCGCGA ATATCGGCGG CGGATCAAGA CGGTCCAGTC CACCAAGAAG 
ATCACCAAGG CGATGGAGCT CATCGCCGCC TCGCGGATCG CCAAGGCCAG GGCGCGGGTC
GCCGCGTCCC GGCCGTACGC GGAGGAGATC ACGCGGGTGA TCAGTGCCGT GGCGTCGCAG
ACGACGATCG CCCATCCGCT CACCACCGAG CGCCCGGAGC CGACCCGTGC GGCCGTGGTC
GTGATCACCA GCGACCGCGG CCTCGCCGGC GGCTACAGCT CCAACGCGCT CAAGCGCGCC
GGGGAGCTGG TCGAGCTGCT GCGTGAGGAG GGCAAGGAGC CGCTGCTCTA CGCGGTCGGC
CGCAAGGCGG GGACGTACTA CCGCTTCCGC GGCCGCCCGC TGGCCGGCGA CTACACCGGC
TTCTCCGAGC AGCCGAGCTA CAGCGACGCG AAGGCGGTGG CGGACGCCCT CATCACGGCC
TTCACCACGC CCACCGAGGA GGGCGGTGTC GACGAGATCC ATCTCGTCTT CACCGAGTAC
GTCAGCGCCA TGACCCAGAA CGCGGTGGCG CACCGCCTGC TCCCGATGGT CCTGCGCGAG
CACGACGAGC CGCCGGCCGG TGGGCCGCTG CCGAACTACG AGTTCGAGCC GTCGGCCGAG
GCCGTCCTCG ACGCGCTGCT CCCGCGGTAC GTCGAGAGCC GGCTCTACGC GGCGCTGCTG
GAGTCGGCGG CCTCCGAGTC GGCGGCCCGC CAGCGCGCGA TGAAGTCGGC GACGGACAAC
GCCGAGGACC TCATCAAGAC CTACACCCGC GCGGCCAACC GGGCCCGCCA GGACGCCATC
ACCCAGGAGA TCTCCGAGAT CGTGGGTGGC GCGAACGCCC TGGCGTCCGG CGCGTAG
 
Protein sequence
MAGQLREYRR RIKTVQSTKK ITKAMELIAA SRIAKARARV AASRPYAEEI TRVISAVASQ 
TTIAHPLTTE RPEPTRAAVV VITSDRGLAG GYSSNALKRA GELVELLREE GKEPLLYAVG
RKAGTYYRFR GRPLAGDYTG FSEQPSYSDA KAVADALITA FTTPTEEGGV DEIHLVFTEY
VSAMTQNAVA HRLLPMVLRE HDEPPAGGPL PNYEFEPSAE AVLDALLPRY VESRLYAALL
ESAASESAAR QRAMKSATDN AEDLIKTYTR AANRARQDAI TQEISEIVGG ANALASGA