Gene Franean1_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1020 
Symbol 
ID5669434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1200340 
End bp1200921 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID641239949 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001505382 
Protein GI158312874 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCAGA ATCTAGTTCT AGCCGCCGCC GAAGAAGGCG CGGAACACGA GGACAGCGTC 
CTTGTGCCGC CGCTCGCCGA GCTGATCGTC GGCCTGCTGG CCTTCGGTCT TCTCGTCGGA
TTCTTCTTCT GGAAGATCTA CCCACAGATC CGTAAGACCT ATGCCGAGCG GGCCGAACGT
ATCGAAGGTG GTCTCAACCG CGCCGAACGG GCGGAGCGCG AGGCACAGGC CCTGCTCGAG
CAGTACCGTT CCCAGCTCGC CGAAGCACGC TCGGAGGCGG CTCGCATCCG CGAGGACGCA
CAGGCACAGG GACGGCAGAT CGTCGAGGAG CTGCGCACGC AGGTGCAGCA GGAGGTCGCC
GAGATCCGCG AGCGGGCGGA CGCGGCGCTG GTCGCGGAAC GTGCCCAGGT CGTGGCCTCC
GTGCGCCGTG AGATCGGTGA GATCGCGCTC GAGCTCGCGA CCCGGATCGT CGGCCGCGAG
CTGGAGAACG ACACCCGCCA GCGGCAGCTC GTCGACGACT TCATCGCGGG TCTCGACGAG
GCTCCGCAGC CTGACGCCGT CCCGGCCGGG CCGGGAGTCT GA
 
Protein sequence
MLQNLVLAAA EEGAEHEDSV LVPPLAELIV GLLAFGLLVG FFFWKIYPQI RKTYAERAER 
IEGGLNRAER AEREAQALLE QYRSQLAEAR SEAARIREDA QAQGRQIVEE LRTQVQQEVA
EIRERADAAL VAERAQVVAS VRREIGEIAL ELATRIVGRE LENDTRQRQL VDDFIAGLDE
APQPDAVPAG PGV