| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0957 |
|---|
| Symbol | |
|---|
| ID | 5669371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1120803 |
|---|
| End bp | 1121870 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641239885 |
|---|
| Product | ribosome small subunit-dependent GTPase A |
|---|
| Protein accession | YP_001505319 |
|---|
| Protein GI | 158312811 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.574399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0511249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGACG ATGCTGGCCG GCTGACCGTG GCACGCGAGA TGGACGAGGA CGACGTCCGT
ACCCGACCCG GCCGGGGCTC CCGGCCGCGG ACGCGGATCC GGCCCGAGCA CGCGGACGCG
GCCCGCGCGG TGGTCGTCGC GGTCGACCGC GGCCGCTACA CCTGCCGCCC GGAGACCGGC
CCGGGCGGCC GCCCGGGCAC GGCCCGGCGT GACACCCCCG CCGGCCGGCG GGAGGGCCCG
GCCGGCCTGG TGGCGGCGGT GCGCGGCGGT TCCATGCGGC GGACGTCCGT CGTGGTCGGC
GACCGGGTCG AACTGGTCGG GGATCTCTCG GGCAGCGCCG GCTCGCTGGC GCGCATCGTG
CGCCGCGACG AGCGGACGAG CCTGCTGCGG CGCACCGCCG ACGACTCCGA CCCGGTGGAG
CGGCCGATCG TCGCCAACGC CGACCTGCTT GTCATCGTCT GTGCGCTGAC CGATCCGCCG
CCGCGCACCG GGCTGATCGA CCGGTGCCTG GTGGCCGCCT ACGACGGCGG GCTGACCCCG
GTCCTGTGCC TGACCAAAGC CGACCTCGCC GACCCGGCCC CCGTGCGGGC GTCCTACGAG
CCGCTCGGGC TGCCGGTGGT CGCCACCCGG CCGGACGGCG ACCTCGACCC GCTCCAGACG
CTGCTGCGCG ACACGACCAG CGTGTTCTTC GGGCACAGCG GAGTCGGCAA GTCGACGCTG
GTCAACCGCC TTGTCCCGGA CGCCGACCGG GCCATCGGGG TGGTCAACGC GGTGACCGGC
CGTGGCCGGC ACACCTCCTC TGCGGCCGTC GCGCTCGCCC TGCCGGACGG CGGGACCGTC
GTCGACACCC CGGGGATCCG CTCGTTCGGG CTGGGCGCCG TCCAGCTCGA GCGGGTCCTG
ACGGCCTTCG ACGACCTCGC GGCCGCGACC GCCGACTGCG AGCCCGGCTG CGACCACCTG
ACCGCTCCGG ACTGCGGGCT CGACGAGGCC GTCCGGCAGG GGCGGGCCGA CCCCGCGCGG
GTGGCGAGCC TGCGCCGTCT GCTCGCGGCC CGCGCGACAC CCGTCTGA
|
|---|
| Protein sequence | MDDDAGRLTV AREMDEDDVR TRPGRGSRPR TRIRPEHADA ARAVVVAVDR GRYTCRPETG
PGGRPGTARR DTPAGRREGP AGLVAAVRGG SMRRTSVVVG DRVELVGDLS GSAGSLARIV
RRDERTSLLR RTADDSDPVE RPIVANADLL VIVCALTDPP PRTGLIDRCL VAAYDGGLTP
VLCLTKADLA DPAPVRASYE PLGLPVVATR PDGDLDPLQT LLRDTTSVFF GHSGVGKSTL
VNRLVPDADR AIGVVNAVTG RGRHTSSAAV ALALPDGGTV VDTPGIRSFG LGAVQLERVL
TAFDDLAAAT ADCEPGCDHL TAPDCGLDEA VRQGRADPAR VASLRRLLAA RATPV
|
|---|
| |