Gene Franean1_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0933 
Symbol 
ID5669347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1090015 
End bp1091385 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content75% 
IMG OID641239860 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_001505295 
Protein GI158312787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.991017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCAG CACCTTCAGG ACTCCCGTGG AGCACGGTCG ACGCCGCGCT GAGAGCCACG 
CACGCACTCC ATCAGATGGA GCAGACGTGC CTCGTCGTGG TGTCGACGGA TGTTGCCACC
TACCTACGGG TGACCGGGCC GATCCCCGAG CTGGTTTCCG GGCTGAGTGT TCCGCGCGCC
CGCTGTCTAC CTGCCCGGAT GCTTGATGGA GCGCCAGCCG CGGGCTCCCG GGCCGACCAG
GATCCCGCCC TGGCCGACAC CGTCGAGCCG GAGCGGTTCG GCATTCTCAG CTATGTCGCG
ATGCCCGTCG TCGGGCCGGA CGGGACCGTT CTCGGCATTC TCACCGGCCT CGACCGCTCA
TCGCTCACCG TTCCCGCCGA GACACTCAGT GTACTGAGGG CGATTGCGGA CAGTCTGGGA
GCGTCGGACG CACTCCGCGA CCAACTCGTG CGGGAGGCCC CCTTGGGGGT TGCTGCCAGT
AACGAGGCAG AGGGTGACGG AACGGGCTCC CGGGGCACCG AGAACGGTGC CGCCGGCGAG
ACGGGTGGTG CGGGGCCCAC CGGGCGGGCG GCCGGCGCGG CTCCCCCGCC CGGCACCGCT
CCGGGTGTCG CTGCTCCCGG TGGCGCCACA CCGAGTGGTA CCGCCCCGGG TTCGGAGAGA
GCACCGCGCG GATCACAACC GCCCTCGCCG GCCGGGGGCC CCGGCCGGAT ACCCACCCCG
GAGGCCGTCG CCCGCGCGAT CAGGCCCGGC CCGCCGGGTC GGCCCGGCGC GCCGCGGCCC
GGACCGCCCC GGTCAGGGCC GCCCCGACCA GGCACCGCAC GGGGCCCCGG CGAGACAGGA
GCCGCCGCCG GCACGCCCGC GCCCGGGGCC TCCGACATGC GGCTGCGCCG CGCGCCCACC
GGCTGGATCG TCGAGGGGCC CGGCGCCGAG ATCCGCCCGG TCGGCGATCT GATCTCCGCG
ATGGTCCTGG CCGACCTGCT CGCCGAGGAC CTCAGCCCGC CCGGGCGGCC CCGGCGCGCC
GATCGCGACC TCAACGAGAC CGAGCAACTG AGGTTGTCGG TGATCCAGCT CGAGCACGCG
CTGGCGTCCA GGGTGATCGT CGAGCAGGCG ATCGGCGTGC TCGCCGAGCG CAACCACATC
AAGCCCCGAG ACGCCTTCGA GCGGCTGCGC CGCACCGCCC GCGGGATGGG CCGGCGGGTA
CACGACCTCG CCCGCCAGGT GGTGGAGTCG GTAGGCGACC CGCGGATCAC CCTGCCCGGG
GAGCTCGGCG GCCGCGGCGG CGGACCGGGC ACGGCGGGCG GGCCCGCGAG CGGTTCCGGG
GGCGGCCAGC CGCGCCCGAC ACCGCCGCGC GCCGCGCCGA GCCGCCGCTG A
 
Protein sequence
MSSAPSGLPW STVDAALRAT HALHQMEQTC LVVVSTDVAT YLRVTGPIPE LVSGLSVPRA 
RCLPARMLDG APAAGSRADQ DPALADTVEP ERFGILSYVA MPVVGPDGTV LGILTGLDRS
SLTVPAETLS VLRAIADSLG ASDALRDQLV REAPLGVAAS NEAEGDGTGS RGTENGAAGE
TGGAGPTGRA AGAAPPPGTA PGVAAPGGAT PSGTAPGSER APRGSQPPSP AGGPGRIPTP
EAVARAIRPG PPGRPGAPRP GPPRSGPPRP GTARGPGETG AAAGTPAPGA SDMRLRRAPT
GWIVEGPGAE IRPVGDLISA MVLADLLAED LSPPGRPRRA DRDLNETEQL RLSVIQLEHA
LASRVIVEQA IGVLAERNHI KPRDAFERLR RTARGMGRRV HDLARQVVES VGDPRITLPG
ELGGRGGGPG TAGGPASGSG GGQPRPTPPR AAPSRR