| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0895 |
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| Symbol | |
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| ID | 5669309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1044613 |
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| End bp | 1046298 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641239822 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001505257 |
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| Protein GI | 158312749 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.822333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.123512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTATTC TGCGCGAGCC GTCCGGCCAC GCCGTCGAAC ACGCGGAAGC CGGACACTCC
CGGCCACGCA CGAACATGCT AGGATATCTT CGCACCACCT CGCACAAGGA TATCGCCGTC
CTGTACGCGG TGACGTCGTT CGGGTTCTTC ATCCTCGCCG GGATCCTGGC CATGATGATG
CGTGCCGAGC TGGCACGGCC GGGTCTGCAG TACTTCTCGA ACGAGCAGTA CAACCAGTTT
TTCACCCTGC ACGGCACGCT CATGCTGCTG CTGTTCGCGA CGCCGCTGGC GTTCGCCTTC
GCGAACTTCC TCATACCGCT GCAGATCGGG TCGCCGGACG TCGCGTTCCC CCGGCTCAAC
GCCCTTTCGT ACTGGTTCTT CCTGTTCGGC GGGCTGATGG TCGTCGCCGG CTTCCTCACC
CCGGACGGCG CCGCGGACTT CGGCTGGTTC GCCTACGCCC CACTGAACAA CAAGACGTTC
AGCCCGTCGG TCGGGGCGGA CATGTGGATC CTGGGCCTCG TCGTCTCCGG GCTCGGGACG
ATCCTCGGCG CGGTCAACAT GATCACCACG ATACTCACCC TGCGCGGCCC CGGTATGACG
ATGTTCCGCC TGCCGATCTT CTGCTGGACG TTCCTCGTGA CGTCCGTGCT GGTGATCGTC
GCGTTCCCGG TGCTGGCTGG GGCCCTGCTG TCGCTGGAGG CCGACCGGCG CTTCGGCGCC
CACGTGTTCG ACTCGGAGAA CGGCGGCGCC ATCCTCTGGC AGCACCTGTT CTGGTTCTTC
GGGCATCCCG AGGTCTACAT CATCGCCCTG CCGTTCTTCG GCATCATCAG CGAGATCATC
CCGGTCTTCT CCCGGAAGCC GGTCTTCGGC TACAAGGGCC TGGTGTTCGC CACCATCGCC
ATCGGCGCCC TGTCGATCGT GGTCTGGGCA CACCACATGT TCGTCACCGG CGCGGTACTG
CTGCCCTTCT TCGCCGTGAT GTCGTTCCTG ATCGCCGTCC CGACCGGTAT CAAGTTCTTC
AACTGGATCG GGACGATGTG GCGGGGCAAG CTGAGCTTCG AGACCCCGAT GATGTTCTGC
CTCGGGTTCC TCGTGACGTT CCTCCTCGGC GGGCTGACCG GGGTGATGCT CGCGAGCCCG
CCGATCGACT TCCACGTCAG CGACAGCTAC TTCGTGGTCG CCCACTTCCA CTACGTGGTG
TTCGGGACGG TCGTCTTCGC GGCGTTCGCC GGCACGTACT TCTGGTTCCC CAAGCTGACC
GGCCGGATGA TGGACGACCG GCTCGGCAAG ATCCACTTCT GGACCGTCTT CCTGGGCTTC
CACCTGACGT TCCTGGTGCA GCACTACCTG GGCATGCAGG GGATGCCCAG GCGGTACGCC
GACTACGGGC CGGGCGACGG ATTCACCACG TTGAACACGA TATCGACCGC TGGCAGCTTC
CTGCTCGGGG TCTCGACACT GCCGTTCATG TACAACGTGT GGAATTCCTA CCGCCGCGGC
CGGCTCGCCG TCGTCGACGA CCCGTGGGGG TACGGGAACT CCCTCGAGTG GGCGACGTCC
TCCCCGCCGC CCCGGCACAA CTTCCACCAG CTGCCGCGCA TCCGCTCCGA GCGCCCCGCC
TTCGACCTGC ACTACCCGGA GGTCGCCGGC GTCACCGACT ACCACGCCAC CCCCGAACTG
CGCTAG
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| Protein sequence | MTILREPSGH AVEHAEAGHS RPRTNMLGYL RTTSHKDIAV LYAVTSFGFF ILAGILAMMM
RAELARPGLQ YFSNEQYNQF FTLHGTLMLL LFATPLAFAF ANFLIPLQIG SPDVAFPRLN
ALSYWFFLFG GLMVVAGFLT PDGAADFGWF AYAPLNNKTF SPSVGADMWI LGLVVSGLGT
ILGAVNMITT ILTLRGPGMT MFRLPIFCWT FLVTSVLVIV AFPVLAGALL SLEADRRFGA
HVFDSENGGA ILWQHLFWFF GHPEVYIIAL PFFGIISEII PVFSRKPVFG YKGLVFATIA
IGALSIVVWA HHMFVTGAVL LPFFAVMSFL IAVPTGIKFF NWIGTMWRGK LSFETPMMFC
LGFLVTFLLG GLTGVMLASP PIDFHVSDSY FVVAHFHYVV FGTVVFAAFA GTYFWFPKLT
GRMMDDRLGK IHFWTVFLGF HLTFLVQHYL GMQGMPRRYA DYGPGDGFTT LNTISTAGSF
LLGVSTLPFM YNVWNSYRRG RLAVVDDPWG YGNSLEWATS SPPPRHNFHQ LPRIRSERPA
FDLHYPEVAG VTDYHATPEL R
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