Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0889 |
Symbol | |
ID | 5669303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1036936 |
End bp | 1037409 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641239816 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001505251 |
Protein GI | 158312743 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.432936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.269103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGACG CCCGCGGCAT GCGGGCCTGG CGGCAGCTCC TGCGGGCGCA CGCGCACGCC ACGCGGCTCC TGGAAGCCGA GCTCGAGGCC GCGCACCAGC TCCCGCTCGC CTCCTACGAC GTCCTCGTGC AGCTTGCCGA GGCACCCGGG TACCAGCTCC GGATGAGCGA GCTGGCGCAG AAGGTGCTGC TGTCCCGCAG TGGGCTGACC CGGCTGGTCG ACCGCCTGGA GCGGGAGGGC CTGGTGGAAC GCCGCTCCTG CCCGTCGGAC GCCCGCGGCA CGCTGGCGAC GCTCACCGAC ACGGGGCTGA AGCGGCTGAG GGACGCCTCG GGAACCCACC TCCGAGGGGT GGCGCGGCAC GTTCTCGACC ATTTCACCCC GCAGGAGCAG GATCTCCTCG GGGATCTGCT GAGCCGGCTC GGCGGTCCCG AACCCACGCC CGCGCCCGGC ACCGGCTGCG GCTCCGGTGT CTGA
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Protein sequence | MVDARGMRAW RQLLRAHAHA TRLLEAELEA AHQLPLASYD VLVQLAEAPG YQLRMSELAQ KVLLSRSGLT RLVDRLEREG LVERRSCPSD ARGTLATLTD TGLKRLRDAS GTHLRGVARH VLDHFTPQEQ DLLGDLLSRL GGPEPTPAPG TGCGSGV
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