| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0874 |
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| Symbol | |
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| ID | 5669288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1019560 |
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| End bp | 1020690 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641239801 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001505236 |
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| Protein GI | 158312728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.254055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.247532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTCG ATCTGGCGCT GCCCGTCGGT GATCTGACGC GTGTCCTCGT GGACGTGCCG
TCGGTCAGCG GCGACGAGGG CACGCTCGCG ACGGCCGTCG AGGAGGCGCT GCGCTCCCTC
GGCGGCCTGG AGATCCTGCG GGACGGCGAC GCGGTGCTCG CGCGGACCGG CCACGGCCTG
CCCGCGCGGG TGCTGCTGGC CGGTCACCTC GACACGGTGC CCGTCGCCGA CAACCTCCCG
GCCCGCCTCG ACGGCTCCCG CCTGTACGGC TGCGGGACGT CCGACATGAA GGCCGGGGTG
GCCGTGATGC TCCGCCTGGC GGCGCTCCTC GGCACCCCGG CGTCGGGGTC GGCGCCCGAG
TCGAGGCCGG GGCCGGTCTC GGGGGCGGGG GCGGTCGCGC GGCACGACGT CACCTGGGTC
TTCTACGACA ACGAGGAGGT CGCGGCCGCC CGTAACGGGC TGCGCCGGCT CGCCGAGCGG
CACCGCGACT GGCTCCAGGC GGATCTGGCG ATCCTCATGG AGCCCACCTC CGGCGAGATC
GAGGCGGGCT GCCAGGGCAC GCTGCGGGTC GTGGCCACGG TGCCGGGCCG CCGCGCGCAC
TCGGCCCGCT CCTGGCTCGG GGAGAACGCC ATCCACCAGG CCGGGGAGCT GCTGAGCCGG
CTGGCGCGGT ACCGGCCGCG GTCCGTCACG CTGGACGGCT GCACCTACCG GGAGGGCCTC
TCGGCGGTCC GGATCGACGG CGGCGTGGCC GGCAACGTGA TCCCGGACAG CTGCCGGGTC
ACGGTGAACT TCCGCTTCGC CCCCGACCGG GACCCGAAGG CCGCGCTGGC CCACGTGGCC
GAGGTGCTGG ACGGCTACGA CCTGGTGCTC GACGACAGCG CCGGCGGGGC CCCGCCCGGG
CTGTCCGCCC CGGCCGCGGC GGCCTTCGTG GCGGCCACCG GGCGGGCCCC GGTGGCCAAG
TACGGGTGGA CCGACGTGGC GCGGTTCGCC GAGCTGGGCA TACCGGCGCT CAACTACGGT
CCCGGCGACC CGAACCTGGC GCACACCCGC GACGAGTACG TCGAGGTGGC GGTGATCGAG
GAGACGGAGC GCGTGCTCAG CTCCTACCTG GTCGGCCGCG GCACGCCCTG A
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| Protein sequence | MGLDLALPVG DLTRVLVDVP SVSGDEGTLA TAVEEALRSL GGLEILRDGD AVLARTGHGL
PARVLLAGHL DTVPVADNLP ARLDGSRLYG CGTSDMKAGV AVMLRLAALL GTPASGSAPE
SRPGPVSGAG AVARHDVTWV FYDNEEVAAA RNGLRRLAER HRDWLQADLA ILMEPTSGEI
EAGCQGTLRV VATVPGRRAH SARSWLGENA IHQAGELLSR LARYRPRSVT LDGCTYREGL
SAVRIDGGVA GNVIPDSCRV TVNFRFAPDR DPKAALAHVA EVLDGYDLVL DDSAGGAPPG
LSAPAAAAFV AATGRAPVAK YGWTDVARFA ELGIPALNYG PGDPNLAHTR DEYVEVAVIE
ETERVLSSYL VGRGTP
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