Gene Franean1_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0868 
Symbol 
ID5669282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1014090 
End bp1014803 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content76% 
IMG OID641239795 
Productflavin reductase domain-containing protein 
Protein accessionYP_001505230 
Protein GI158312722 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.240136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.360955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCC CCGCGCGCCA GCCCCTGCCC GAACCCGCTC CGGCGGAGAC GGCCCGCGCG 
CAGCCGTGCC CGGCCGAGCT CCAGCCCGGG CCCGACCTCC CCGCCGCCGG CTCCCTGGAC
GGCCCGGCGT CTCCGGACGG ATTGGCCGTG CCCGACGCGG CGGCGTTCCG CCGGGTGGTC
GGCCGGTTCG CTACCGGGGT GACCGTCCTG ACCACGGTTG TGGACGGGCA CCAGCTCGCG
ATGACGGCCA ACTCCTTCGT CTCGGTCTCC CTCGACCCGC TGCTCGTCCT CGTCAGTGTG
CGTCAGGACG CCCGATTCCA CGCCCCGCTC CTCGACGCCG GGGTGTGGGG GGTCTCGATC
CTCGCCGCCG ACATGGATCA GGCGTCCCGC GACTTCGCCC GCCGCGGCGC CGACCGGCCC
ACCGGCGACG GGTGCGGGGG CGACGGGCGG TCCGGCGGTG GCGGGGGGCA GCTCCTGGGC
TGGCGGTACT CGCTCGGCGC GCGGACCGGG GTCGCCCTGC TGGAGGGCGC GCTCGCCGTC
CTGGAGTGCA GGACCGTCGC GACGCATCCG GGCGGTGACC ACACGCTGGT GATCGGAGAG
GTGGTCGCGC TGGCGGCGCA GCGGCCGGAT GCCGCTCCGC TGATCTTCTA TGAGGGCTCG
TACCTCTCGG CCGACCAGCC GGCTCGCTCG CGCCGGGCCG GCTCGTCCTC GTAA
 
Protein sequence
MASPARQPLP EPAPAETARA QPCPAELQPG PDLPAAGSLD GPASPDGLAV PDAAAFRRVV 
GRFATGVTVL TTVVDGHQLA MTANSFVSVS LDPLLVLVSV RQDARFHAPL LDAGVWGVSI
LAADMDQASR DFARRGADRP TGDGCGGDGR SGGGGGQLLG WRYSLGARTG VALLEGALAV
LECRTVATHP GGDHTLVIGE VVALAAQRPD AAPLIFYEGS YLSADQPARS RRAGSSS