Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0868 |
Symbol | |
ID | 5669282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1014090 |
End bp | 1014803 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641239795 |
Product | flavin reductase domain-containing protein |
Protein accession | YP_001505230 |
Protein GI | 158312722 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.240136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.360955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAGCC CCGCGCGCCA GCCCCTGCCC GAACCCGCTC CGGCGGAGAC GGCCCGCGCG CAGCCGTGCC CGGCCGAGCT CCAGCCCGGG CCCGACCTCC CCGCCGCCGG CTCCCTGGAC GGCCCGGCGT CTCCGGACGG ATTGGCCGTG CCCGACGCGG CGGCGTTCCG CCGGGTGGTC GGCCGGTTCG CTACCGGGGT GACCGTCCTG ACCACGGTTG TGGACGGGCA CCAGCTCGCG ATGACGGCCA ACTCCTTCGT CTCGGTCTCC CTCGACCCGC TGCTCGTCCT CGTCAGTGTG CGTCAGGACG CCCGATTCCA CGCCCCGCTC CTCGACGCCG GGGTGTGGGG GGTCTCGATC CTCGCCGCCG ACATGGATCA GGCGTCCCGC GACTTCGCCC GCCGCGGCGC CGACCGGCCC ACCGGCGACG GGTGCGGGGG CGACGGGCGG TCCGGCGGTG GCGGGGGGCA GCTCCTGGGC TGGCGGTACT CGCTCGGCGC GCGGACCGGG GTCGCCCTGC TGGAGGGCGC GCTCGCCGTC CTGGAGTGCA GGACCGTCGC GACGCATCCG GGCGGTGACC ACACGCTGGT GATCGGAGAG GTGGTCGCGC TGGCGGCGCA GCGGCCGGAT GCCGCTCCGC TGATCTTCTA TGAGGGCTCG TACCTCTCGG CCGACCAGCC GGCTCGCTCG CGCCGGGCCG GCTCGTCCTC GTAA
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Protein sequence | MASPARQPLP EPAPAETARA QPCPAELQPG PDLPAAGSLD GPASPDGLAV PDAAAFRRVV GRFATGVTVL TTVVDGHQLA MTANSFVSVS LDPLLVLVSV RQDARFHAPL LDAGVWGVSI LAADMDQASR DFARRGADRP TGDGCGGDGR SGGGGGQLLG WRYSLGARTG VALLEGALAV LECRTVATHP GGDHTLVIGE VVALAAQRPD AAPLIFYEGS YLSADQPARS RRAGSSS
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