| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0841 |
|---|
| Symbol | |
|---|
| ID | 5669257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 984875 |
|---|
| End bp | 985480 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641239770 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001505205 |
|---|
| Protein GI | 158312697 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCACCCC ATCTGGGGGG TGCCTTGGGC GGCTTACACC TGTACGTTCC TTTTGTGGCG
GTCACGAACA ACGCGGTGAT CGGTGTTGCG CTGGGGTACA TCGAGGCCAA CCCCGACGAG
ACGGACCTAC TACGTTCCCT GATCGTGCTC GCACTGCACG GGCCGCCAAT CGTCACTCGC
TCCACGACTC CGGCCCATGT CACGTGCAGC GCGGTGCTGG TCTCGCCCGA CTGGCGGGTG
CTGCAGACCA GGCGGCGCCC CGCCAGGAAC TGGCGGCTGC CGGGCGGGCA CATCGACCCC
GAGGACCAGT CGCTGCTCGG CGTCGCGCTG CGCCACCTCG CGACGGAGGC CGACATCGAG
GCGAACGGCC TGATCCCGGC GAGCGTGTTA CCCGTTGACG TGACGGCCCA CCCCATCGAC
GCCGTCCCCG CGCTCAGCGA GCCCGAGCAC GTGCACTACG AGGCCACTTT CCTGCTGCAC
GTCGACGACC GCACGCTGCC CGAGCCGTCG GCCCGGGGGA TCTCCCGCCG CTGGGTGAAC
CTCGCCGACG TACGCGGCAA GCTCGGCGAC AAGCTCCGGC TGGCCTCCAA CCGCGCCGAG
GTCTGA
|
|---|
| Protein sequence | MSPHLGGALG GLHLYVPFVA VTNNAVIGVA LGYIEANPDE TDLLRSLIVL ALHGPPIVTR
STTPAHVTCS AVLVSPDWRV LQTRRRPARN WRLPGGHIDP EDQSLLGVAL RHLATEADIE
ANGLIPASVL PVDVTAHPID AVPALSEPEH VHYEATFLLH VDDRTLPEPS ARGISRRWVN
LADVRGKLGD KLRLASNRAE V
|
|---|
| |