Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0716 |
Symbol | |
ID | 5669132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 833186 |
End bp | 833857 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641239643 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001505080 |
Protein GI | 158312572 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0951056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGC CCCGCCGCCT CGGCGCGGAG GACTCGAGCA CCCGCACGAC CCTGCTCGAC GCGACGGCCC AGATCATCCT CGAGGAGGGG TACGCCGCGG TCAGCTCGCG GCGGGTGGCG GCGAAGGCCG GCATCAAGCC CGCCCTCGTG CACTACTACT TCCGCACCAT GGACGACCTG TTCCTCGCCG TCTTCCGGCG CGGCGCGGAG GCCAACCTGG AGCGCCAGCG GCGCGCGCTG GCCTCGCCGC GGCCCCTGCG GGCGCTGTGG GACGTCGACC TGGATTCGCG CGGCACGACC CTCATGGTCG AGTTCATGGC GCTCGCGAAC CACCGGAAGG CCATCCGGTC GGAGATCGCC GCCTACGCCG AGCGGTTCCG CGAGGCGGAG CTCGCCACCC TGTCGCGAGT ACTGACCGCC GCCGGAGTCG ATCCGGCCAC GATTCCGCCG GTGGTCGTGA CGTGCCTGAT GGCGAGCGTC TCCCGGGTTC TGGTGATGGA GGGCGCGCTG GGCATGACCA TGGGCCACCG CGAGACGATC GACCTGGTCG AGCGATACCT GACCGAGATC GAGGCCCGCA CCCCGCCCGA CCCCGTGGAC GCCGCCGACG CGCCCGCCCC CGCGGTGAGC CCCACCGCCA GCCCCGACGG GCCCGCGGGT CCCGGGGGCT GA
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Protein sequence | MTSPRRLGAE DSSTRTTLLD ATAQIILEEG YAAVSSRRVA AKAGIKPALV HYYFRTMDDL FLAVFRRGAE ANLERQRRAL ASPRPLRALW DVDLDSRGTT LMVEFMALAN HRKAIRSEIA AYAERFREAE LATLSRVLTA AGVDPATIPP VVVTCLMASV SRVLVMEGAL GMTMGHRETI DLVERYLTEI EARTPPDPVD AADAPAPAVS PTASPDGPAG PGG
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