Gene Franean1_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0659 
Symbol 
ID5669076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp772217 
End bp773632 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content74% 
IMG OID641239586 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_001505024 
Protein GI158312516 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0481875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.873986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCT CCCCCGCCGC CGGGCCTGAG GCGTCCGCCG GCGCGCCCTA CGACCTGCTC 
GGCGTGGGGC TGGGCCCGTT CAACCTGTCG CTGGCGGCGC TCGCCGACGG CGTGCCGGGG
CTGCGGACGG CCTTCTTCGA GCGGCAGGAC GCGTTCCGCT GGCATCCCGG GCTGCTGCTC
GAGGGCACGT CGCTGCAGGT GCCGTTCCTG GCCGACCTGG TCACGCTGAT CGACCCGACC
AGCCGCTGGT CGTTCCTGTC CTACCTGCGT GAGCACGACC GGCTGTTCCG GTTCTACCTC
TACGAACGCT TCCACCTGCC GCGCCGTGAG TACGACGACT ACTGCCGCTG GGTGGCGCAC
GCCCTGGGGT CGGCGCGGTT CGGCTCCCGG GTCGACGCGG TGCGCTGGCA TCCCGACGCC
GCCCTGTTCC GGGTGACGGT CAGCCACGCC GGCGAGCCTG CCCCGGTGAC CGTGACGGCG
CGCAACCTGG TGCTCGGCGT GGGCACCGAG CCGGCCGTCC CGGAGGCCTT CGCCGCCGTG
ACCGGCCCCC GGGTGTTCCA CTCGGCCGAC TACCTGGGAC GTCGCGACCA GCTCGACGGC
GCCCGGCACG TCACCGTCGT CGGCTCCGGG CAGTCCGGCG CCGAGGTGTT CCTCGACCTG
CTCCGCTCGC AGCCCGGGAC GGGGCACTCG CTGGCCTGGA TCACCCGGAC CAGGGCCTTC
GCCCCCATGG AGTACTCCAA GCTGGGCCTG GAACAGTTCA CTCCTGACCA CGTCCGCTAC
TTTCACGGAC TCGACCAGGA GACGAAGGAC GCCGTCGTCC CCGGCCAGTG GCAGCTGTAC
AAGGGCGTCG ACGCGCAGAC CATCGCCGAG ATCTACGACC TGCTCTACGA ACGCAGCATC
GGCGGCGCCG ACGCGGACGC CCTGCTGCTG CCTAACGTGT CGGTGAAAGG GGTGACCCAC
GGCGGCGGAG AGCTCAGCTA CCGCCTGCGC TGCCGGCACC GTGACCAGCA CCGGGAGTTC
GCCGTCGACA CCGATGCGGT CGTGCTTGCC ACCGGCTACG CGGCCCGCCG GCCGGCGCTG
CTCGATCCGG TGGCCGGGCT GCTCGACCTC GACGCCGGCG GCCGGTTCAA GGTCGACGAG
CGGTACCGGG TCGCGACCGA GCCGGAGGTG AGCGGGCGGA TCTACGTCCA GAACGCCGAG
CTGCACACGC ACGGTGTGGG CGCGCCCGAC CTCGGGCTGG GGGCCTGGCG GGCGGCGGTC
ATCCTCGATG ATCTCACCGG TGGCCGGGCG CACCGCCTGC CCCGCCCGGC CGCGTTCACC
ACCTTCGGCG CCCCGGCCCG GCCCCAGTCG CCCGGCGGGC CCGCCGCAGG CACCGCTCCG
GCCCGGCCCG TCGAGGTCGG CGGAGCGGGC CGTTGA
 
Protein sequence
MSPSPAAGPE ASAGAPYDLL GVGLGPFNLS LAALADGVPG LRTAFFERQD AFRWHPGLLL 
EGTSLQVPFL ADLVTLIDPT SRWSFLSYLR EHDRLFRFYL YERFHLPRRE YDDYCRWVAH
ALGSARFGSR VDAVRWHPDA ALFRVTVSHA GEPAPVTVTA RNLVLGVGTE PAVPEAFAAV
TGPRVFHSAD YLGRRDQLDG ARHVTVVGSG QSGAEVFLDL LRSQPGTGHS LAWITRTRAF
APMEYSKLGL EQFTPDHVRY FHGLDQETKD AVVPGQWQLY KGVDAQTIAE IYDLLYERSI
GGADADALLL PNVSVKGVTH GGGELSYRLR CRHRDQHREF AVDTDAVVLA TGYAARRPAL
LDPVAGLLDL DAGGRFKVDE RYRVATEPEV SGRIYVQNAE LHTHGVGAPD LGLGAWRAAV
ILDDLTGGRA HRLPRPAAFT TFGAPARPQS PGGPAAGTAP ARPVEVGGAG R