Gene Franean1_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0602 
Symbol 
ID5669019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp700050 
End bp700958 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content74% 
IMG OID641239529 
ProductK transporting ATPase KdpC subunit 
Protein accessionYP_001504967 
Protein GI158312459 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTC GGCTTCCGTC CTGGCTGCGC CAGCACCTCG CGGCGCTGCG CGCCCTGCTC 
GTCCTCACCG TCCTGCTCGG GCTGGCCTAC CCGCTGGCGA TCCTGGCGCT AGCCCAGATC
CCCGGCCTCA AAGACAGGGC GGACGGCTCC CTCGTCACCA ACGCGGAAGG CCAGCGGGTC
GGTTCCTCCC TGATCGGCCA GTCGTTCACC GACAGCGACG GCAACGCGCT GCCCGCGTAC
TTCCAGAGCC GGCCGTCCGC CGCGGGCGAC GGCTACGACC CGACCGCCAC GTCGGCGTCC
AACCTCGGGC CCGAGGATGT CGTCGACACC CCCGACGACC TGGCCACCCC CGAGGACGAG
AGCCGGCAGA GCCTGCTCAC CCAGGTCTGC GAGCGCAGCC TGGCGATCGG TGAGCGGGAG
GGGGTCGACG GCGGCCGGAA GTACTGCACC GCCTCCGGCG TCGGGGCCGT CCTCGCCGTC
TACCACGCCG GCCCCGGTCC CGCCGGCCCG ATCATCCGGG TGGTGAGCGC CAACGAGCCC
TGCCCCACCA CCCCGTTCCT CGCCACCTAC CAGGGAATCG CGGTCGCCTG CCGCGCCCCC
GGCGACGACA TCGCCGCGGG TGAACGGGTC CTCGTCCGCG GCGACGCTCC CGAGACCCCG
GCCGTGCCCG CCGACGCGGT GACCGCCAGC GGCAGCGGCC TCGACCCCGG CATCAGCCCG
GCCTACGCCG AGCTGCAGAT CCCGCGGGTC GCCCGCGAGC GCGGCCTGCC CGCCGGCAAG
GTCCGTGACC TCGTCAACGA GAACACCACC GGACGGGCCC TGGGCTTCAT CGGCGAGCGC
AGCGTCGACG TCCTCGAGCT GAACCTCGAT CTCGACGCGC TCGCGCCGGC CGCCGCCGCC
CGCAGCTGA
 
Protein sequence
MSTRLPSWLR QHLAALRALL VLTVLLGLAY PLAILALAQI PGLKDRADGS LVTNAEGQRV 
GSSLIGQSFT DSDGNALPAY FQSRPSAAGD GYDPTATSAS NLGPEDVVDT PDDLATPEDE
SRQSLLTQVC ERSLAIGERE GVDGGRKYCT ASGVGAVLAV YHAGPGPAGP IIRVVSANEP
CPTTPFLATY QGIAVACRAP GDDIAAGERV LVRGDAPETP AVPADAVTAS GSGLDPGISP
AYAELQIPRV ARERGLPAGK VRDLVNENTT GRALGFIGER SVDVLELNLD LDALAPAAAA
RS