| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0544 |
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| Symbol | |
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| ID | 5668961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 630384 |
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| End bp | 631904 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239471 |
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| Product | glycosidase PH1107-related |
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| Protein accession | YP_001504909 |
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| Protein GI | 158312401 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2152] Predicted glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.134151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCGGCA GCACCCGGAC CACAGCTGCC GGGTCGGCCC AGAACGACCT GGTCACGCGG
CATCCGCTGG GGCTCTCCCC GAACAGCGAC CGGGTCATCG CGAAGCTCTT CCTGCCCGGT
GAGGAGGGCA GCCAGCCGCA CTCCCGGGCC GCCGGCATCG TGGCCCGGGC TCTCGCCCTG
CCCGAGCGGG AGGTCGACAG CCTGGTCGCC GACCTCCTCG AACGGTTCGA GCCGCGCCAC
CGGGACTACC GGGGCATCCT CGCGCGGCAT GCCGCGGTGG TGACTCCGCG GGTGCCGGTG
CCCGCGGAGC TCTCCCCAGC GCGCTGTCTG CTGCTCGGCG CGTGTTTCAC CGCCGAGTAC
GCGGTGGAGG GCGCGGCCGT CACCAACCCC TCGGCGGTGC CGCACCCCGA CCAGACCGGG
CTGCCGTCCG GCGCGCTGCG ACTGGCGTTG AGCCTGCGCG CTGTCGGGGA GGGCCATCTG
TCCTCGATCG GCTTCGCCGT CGCGGTGATC GGTCCGGGCC CGGCGGTGCG CCTGGAGTCG
CGGACCGGCC CACTCACCAC CGGCGTCGCC GTACCCGTCG AGTGGGAGGC CGCCCGGCTG
CGCGCCGTGC TCACCGAACA CGGGCTCGAC GACGAGGTCA CCCGTGCCGT CCTCCAGAGC
CTGGACCCAC GGCGGCCCGG CAGTGAACCC GACCCCGATC TCTCCCGTGC CTTCGCCGCG
GTTCCCCCCG ACCTGCTCCG TCGCCCCCAG GCACCCGGGA TCCTCGCCGG GATCCGCTCG
ATCGCCGGAT CATTGCGGCG GGTCGAGTTC CCACCCGACA GCGCCCTGCC GCAACGGGTG
CTGTGGCCCA CCGTCACCAG CGAGAGCAAC GGCATGGAGG ACGCGCGGTT CGTCCGGTTC
ACCGCGCCGG ACGGGACCGC GGACTACCGG GCCACCTACA CCGCCTTCGA CGGCACGGAC
ATCTCCCCGC GCCTGCTCAC CAGCCCCGAC CTGCGGGTCT TCACCACCGC ACCGCTCACC
GGCCCGGCCG CCCGTAACAA GGGCATGGCG CTGTTCCCCC GGCTGGTCGA CGGTCGCCAT
CTCGCGCTCT GTCGCTCCGA CGGCGAGTCC ACCGGTCTGA CCGCATCGGA TGACGGCCAG
GTATGGGGGC CGGCGCGTCC GCTCCACGGG CCGCGGGTCG CCTTCGAACT GCTCCAGGTG
GGCAACTGCG GGTCCCCGGT CGAGACGTCC GCGGGCTGGC TCACGCTCAC CCACGGCGTC
GGGCCGATGC GGACGTACAC CATCGGCGCG ATCCTGCTTG ATCTCGACGA TCCGGGAAGG
GTGGTCGCGG CGCTGCCCGA ACCACTGCTC GCTCCGACCG GGCAGGAGAG CACGGGCTAT
GTCCCCAACG TCGTCTACTC CTGCGGCAGC CTGATCCACC ACGGTCTGCT GTGGCTGCCG
TACGGGATCG GCGACACCCG GATCGGGATG GCCAGCGTGC CCGTCGACCG GCTCCTCGCA
CGAATGGTTC CCGTCGGGTG A
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| Protein sequence | MIGSTRTTAA GSAQNDLVTR HPLGLSPNSD RVIAKLFLPG EEGSQPHSRA AGIVARALAL
PEREVDSLVA DLLERFEPRH RDYRGILARH AAVVTPRVPV PAELSPARCL LLGACFTAEY
AVEGAAVTNP SAVPHPDQTG LPSGALRLAL SLRAVGEGHL SSIGFAVAVI GPGPAVRLES
RTGPLTTGVA VPVEWEAARL RAVLTEHGLD DEVTRAVLQS LDPRRPGSEP DPDLSRAFAA
VPPDLLRRPQ APGILAGIRS IAGSLRRVEF PPDSALPQRV LWPTVTSESN GMEDARFVRF
TAPDGTADYR ATYTAFDGTD ISPRLLTSPD LRVFTTAPLT GPAARNKGMA LFPRLVDGRH
LALCRSDGES TGLTASDDGQ VWGPARPLHG PRVAFELLQV GNCGSPVETS AGWLTLTHGV
GPMRTYTIGA ILLDLDDPGR VVAALPEPLL APTGQESTGY VPNVVYSCGS LIHHGLLWLP
YGIGDTRIGM ASVPVDRLLA RMVPVG
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