| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0503 |
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| Symbol | |
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| ID | 5668922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 583538 |
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| End bp | 585370 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641239432 |
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| Product | hypothetical protein |
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| Protein accession | YP_001504870 |
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| Protein GI | 158312362 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGAC GGCACACAAC GGCCGGGGCC CGCAACGGTA TGCTGCCGAT ATTCGGCCTC
GGCATCGCGG CCTGGTACGA CGTACGGACC AGGCCGTTGC GAACGCTGGC CGCGGTCGCT
GGGATGATCG CCGCGGTCGG CGCACTGATG GTGGTAGACG CGGCTGGGGT CCTTTCCCGA
CACGGCGCGG ACGACTATCT GCGCCGCCAG TACGGTCAAC CCGCGACTTT TCTGATCTCC
GGTACCGGCT CCTCCGATGC GCGACGGCAA ACCGAGGCCG ACACCCTGCT CACCCAGGGG
CTTGACCAGG CGGGATTCAG AACGATCAGC CCCTACCAGC TGGTTCGTGG GATCACGCTC
GACGGCGACC ATTCGGCGGC CGTCGACACG GCGGTCGTCG ACGGCTCCTA CCCGGATGTC
AGAGTCATCG ATCTCGTCGC GGGGGACTTC CCCACCCGGG CAGCTGACAG AGGTGTTCCC
CGCGCCGTCC TCGAGGAGGG GATCGCGCGC CAGCTCGGCT GGGAGCCTCA CCAGATCGTC
GGACGACAGC TCCAGTACGC GGTGACCGGA ACAGCCGCCA CCATCGACAC CCGGAACCCG
CGAACGATGA CGGTCGTCGT GGACGCGGTC ATGGCCTCCA CGGCACGCGG CGATTCCGTC
CCACGGCTCC TCCTTGTCGG TCGCCTGCCC CCACAGCTGC ACTCGGCGGC GGAAGACACC
CCAGGTAGAT GGCTGGCCCG GGTGGCACCT GCCGATACCG CCTACTTCCA GGAAGTCGTG
GCGAGCACGG GGCGACGGCT CGGATCGGGA AGCGGCTTCG AGGCCACCAG GCTGGATCAG
GACGAGGCTC TGGCACCCGT CATCGATCAG CAGACCCGGA CCGCCGGCAT CGTCGCCTGG
GTGGCGATGG CCGTCGGTGG CCTCGGCATG CTCGGTGTCG GCGTCGCCTC CGTCCGGGAA
CGTGCTCGTG AACTCGGCGT GCGCCGAGCG CTCGGCGCAT CCCGCGCAAC CATCTTCCTG
GGCGTTCTCG TCGAGACAAT GTTCAACGTG CTGGTAGCGG CCGCACTCGC CGTGCCACTG
GCCGCCCTGA TCGTCCACTT GCTGCCACTA CCTGTTCAAC ATGGGCACCG CCACATCGCG
CTTCGTCGTC GACCTGCGCG GATCGGGCAC CGCTCGGCTC CTGGACCTCT GGAACGGCAC
CACCCAGCCG GTCGCCAGCA CCGTCGACGG CGACCGTCAC ACCCTTGCCT TCACGCTCGG
TCCCGGCGGG ACGGCGGTCG TTCACCTCGG CACCGGGCCG GGTCTTGCCG CCCGCCCGGT
CCAGACCGAG GCCCCGAGCG AACCCGCGCA GGTCGTGTGG TCGCAGAACC TGAACCGCTG
GGACATCGAC GTGGCGGACT GGCGGCCCAC GGGGACGGTG CGGCACCGTC AGTCCATCAG
CGCGCCTGCC GACTGGCGGA CCATCCCGGC GCTCGCCGAT GCGGCCGGTG TCGGTACCTC
TACCGCACGA CGGTGGTTCT GCCAGCCGGT TGGGACACCG GCGTCGGCGC GGTGCTGCTG
GAGCTGGGCC AGGTCGCGGG GACGATGCGG GTGAGTGTCA ACGGGCGGAG CGCGGGCGAT
GACTGCGTCG CGACCCGAGC GCTGGACGTG CGTCCGCTCC TACGGGATGG CGCCAACCAC
GTTGAGATGG AGATCGCCAC GACCCTGGGA AACCGCCTGA TCGGACTCGG TAAGGCGGGC
GAGGAGGCCT ACGCGCGGTT CGCCAAACGG TCGCCCCGAC CGGCGGGCCT CATCGGGCCC
GTGTCACTGA GTGGGATCGC CGCCACGACG TGA
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| Protein sequence | MRRRHTTAGA RNGMLPIFGL GIAAWYDVRT RPLRTLAAVA GMIAAVGALM VVDAAGVLSR
HGADDYLRRQ YGQPATFLIS GTGSSDARRQ TEADTLLTQG LDQAGFRTIS PYQLVRGITL
DGDHSAAVDT AVVDGSYPDV RVIDLVAGDF PTRAADRGVP RAVLEEGIAR QLGWEPHQIV
GRQLQYAVTG TAATIDTRNP RTMTVVVDAV MASTARGDSV PRLLLVGRLP PQLHSAAEDT
PGRWLARVAP ADTAYFQEVV ASTGRRLGSG SGFEATRLDQ DEALAPVIDQ QTRTAGIVAW
VAMAVGGLGM LGVGVASVRE RARELGVRRA LGASRATIFL GVLVETMFNV LVAAALAVPL
AALIVHLLPL PVQHGHRHIA LRRRPARIGH RSAPGPLERH HPAGRQHRRR RPSHPCLHAR
SRRDGGRSPR HRAGSCRPPG PDRGPERTRA GRVVAEPEPL GHRRGGLAAH GDGAAPSVHQ
RACRLADHPG ARRCGRCRYL YRTTVVLPAG WDTGVGAVLL ELGQVAGTMR VSVNGRSAGD
DCVATRALDV RPLLRDGANH VEMEIATTLG NRLIGLGKAG EEAYARFAKR SPRPAGLIGP
VSLSGIAATT
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