Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0466 |
Symbol | |
ID | 5668887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 551311 |
End bp | 551880 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641239397 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001504835 |
Protein GI | 158312327 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGGA ACAGACGCGA GGAGATCCTC GACATCGCGC TGGAGATGTT CGCCGAGCAC GGCTACCGAG GAACCTCGCT CGATGCCATC GCGCAGCGGG TCGGCCTGAC CCGCCAGGGT GTTCTGCACT ACTTCTCGAG CAAGGAGAAG CTGCTAACCG AGATCCTCCG GCGCCGCGAG GAACTCGGCC GCGAGCACCT GCTGGCAGGC CACGCACACG AGGACCTCCC ACACCAGATG GCCGCCATCG TGGCCCACGA TCACCAGCGG CCAGGACTCA CCCAGGTCTA CGGGGTGCTA CTGGGCGAAA GCCTCACGCA CGGCCATCCG GCGCAGGAGT ACTTCCGCGG CCACTACGCG ATGGTCCGTG AACGCATGGC AGCCGACTTC ACTGCGCGGT GGGGTGAGCG CCTTCCCAAC GGACTGACCC CACGGGCTGC GGCGACGGCC CTGCTGGCCC TCCTCGACGG TATGCAGCAG CAGTGGCTGC TCGACCGCTC CCAGACCGAC CACTCGGAGA TCATCCGGGA TGTCCTCGCA GTCCTTCTCG GTCTACCTCC CACGGAGTGA
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Protein sequence | MARNRREEIL DIALEMFAEH GYRGTSLDAI AQRVGLTRQG VLHYFSSKEK LLTEILRRRE ELGREHLLAG HAHEDLPHQM AAIVAHDHQR PGLTQVYGVL LGESLTHGHP AQEYFRGHYA MVRERMAADF TARWGERLPN GLTPRAAATA LLALLDGMQQ QWLLDRSQTD HSEIIRDVLA VLLGLPPTE
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