| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0465 |
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| Symbol | |
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| ID | 5668886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 550491 |
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| End bp | 551198 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641239396 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001504834 |
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| Protein GI | 158312326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA TCGCGATCGT CACCGGCGCG GCGGGCGGTA TCGGCGCGTC GGTCGCACGG
CAGCTGACAG GATCGGGAAC GCACTGCGTC CTGGTGGACC GCGATCCGAC CGTCGAGCGC
GTCGCCTCCT CGCTCGGCGC CGACGCGGTG GTGGGCGACC TGACTGACCC CGATCTGTCG
CTACGCATGG TCGCCGCCGC GGGTAACCGG GTGGACCTGC TCGTCCTCAA CGCCGGGGTT
AACTCCATCG ACAAGGACCC CGCGACGCTC GACCTGGGCC GCTACCACGC GGTCGTGGGG
GTCAACCAGC ATTCCGTGGT CTATGGATTG CGCGCCGCGC TGCCGTCGAT GCGCCGGCAG
GGGAGCGGTT CGATCGTGGT GACCGCCTCA CACGCCGCCC TGCGGGGCGT GGAACAGGAC
CCCATCTACA CGATGACCAA GCACGCCGTC ATCGGTCTGG TCCGCGCCCT GGCCGGTCCC
CTGTCCCGCG AGGGCATCCG CCTCGGTGCG GTCTGCCCCG GTCTCGTTGA CACCCCCCTC
ACTGCCGGAG CCCGCGAGCG CTTTCATGCC TCGGGCATCC CCATGCTCAC CGCCGACGAG
GTCGCCACCG CCATCGTGGA CACCCTCCGC ACCGGCGAAC CAGGAACCGA ACTTGTTCTC
AGCCCTGGAC ACCCGCCCGC CCGCTACAGC CCCGCACCGA TCATCTGA
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| Protein sequence | MNEIAIVTGA AGGIGASVAR QLTGSGTHCV LVDRDPTVER VASSLGADAV VGDLTDPDLS
LRMVAAAGNR VDLLVLNAGV NSIDKDPATL DLGRYHAVVG VNQHSVVYGL RAALPSMRRQ
GSGSIVVTAS HAALRGVEQD PIYTMTKHAV IGLVRALAGP LSREGIRLGA VCPGLVDTPL
TAGARERFHA SGIPMLTADE VATAIVDTLR TGEPGTELVL SPGHPPARYS PAPII
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