| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0446 |
|---|
| Symbol | |
|---|
| ID | 5668868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 525541 |
|---|
| End bp | 526257 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641239378 |
|---|
| Product | hedgehog/intein hint domain-containing protein |
|---|
| Protein accession | YP_001504816 |
|---|
| Protein GI | 158312308 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCGG ACAAGTTCTG GGCCGGCGTC AGAGCCTCCC TCGCCGGGGT GAAACCACCC
GCCCCGGCAC GCGGCTACAC TTTCGATCCC TCCCGCGCCT CGCAGGACGA CCTGAACCGC
ACCCTGGCGC GCGGGAGCGC AGCAAACCCC ACAGTGTGCA GCGCTCAGTG CCCAGGCAGC
ACCGTCAGCG GCGGCCTTTC TCGCGATCGT TGCGGCGACG CTTGCATGTA CATAGGCGTC
GGTGCCGGCA TCGCCGCCAT AGCCGGCGTC ACCGTGCTGA CCGATGGTCT CATCGCGGCA
CCGGAAGGCG CTGCCGCCGG TGGTCTCGGC CGCGCCGTCC GCGGCTGCAC CGGCCGCAAC
AGTTTCGACG GCGCCACCGG CGTCCTCATG GCCGACGGAA CCCACAAACC CATCCGCGAC
GTCCATGTCG GTGACCAGGT CCTCGCCACC GACCCCACCA CCGGCCGCAC CGAACCCCAC
ACCGTCACCA ACCTGATCAT CGGCACCGGC GACAAACACC TCGTCGACAT CACCCTCGAC
ACCCCCGGCC CCGATGCCAC CCTCACCGCC ACCGACCACC ACCCCTTCTG GGACGAAACC
GACCACACCT GGGTCGACGC CGACGACCTC ACCACCACCA ACCGCCTCCG CACCCCCACC
GGTACCCTCC TCGCGGTAGT CGCCTGTGGG GTGCCAGAAG TCGGCCTGAG CCTGTGA
|
|---|
| Protein sequence | MGADKFWAGV RASLAGVKPP APARGYTFDP SRASQDDLNR TLARGSAANP TVCSAQCPGS
TVSGGLSRDR CGDACMYIGV GAGIAAIAGV TVLTDGLIAA PEGAAAGGLG RAVRGCTGRN
SFDGATGVLM ADGTHKPIRD VHVGDQVLAT DPTTGRTEPH TVTNLIIGTG DKHLVDITLD
TPGPDATLTA TDHHPFWDET DHTWVDADDL TTTNRLRTPT GTLLAVVACG VPEVGLSL
|
|---|
| |