Gene Franean1_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0410 
Symbol 
ID5668834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp488900 
End bp489325 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content73% 
IMG OID641239343 
Productintegrase, catalytic region 
Protein accessionYP_001504782 
Protein GI158312274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.13708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA AGTACGAACT GATCGCCGCG GAGAAGGACG ACTACCCGAC ATCCAAGATG 
TGCCAGTGGC TCGTCGTATC GACGTCCGGT TTCTACGACT GGCACCGACG ACCGGCATCG
ACCCGGACCC GCCGGCACGC CACCCTCGAC ACCCAGGTCC GGGCGGTGTT CGCCGCCTCG
CGCCAGACCT ACGGCGCCCG GCGGATCGCA GCCGCCCCGA CCGCCTCCGG CGTGCGCATC
TCCGTCCGCC TCGCCCGACG GATCACGCGC CGTGCAGGGC TGAAAGCCTG CCAGCCCAGG
GCCTACCGCC GCACCACCAT CCCCGGCCAG GCCCCGGCGC CCGCCGACCA CGTCCGCCGC
GACTTCACCG CCACCCGCCC CGGCGAGAAG CTCGTCGGGG ACATCGGCAC CGGTCGCCGC
CCCTGA
 
Protein sequence
MTDKYELIAA EKDDYPTSKM CQWLVVSTSG FYDWHRRPAS TRTRRHATLD TQVRAVFAAS 
RQTYGARRIA AAPTASGVRI SVRLARRITR RAGLKACQPR AYRRTTIPGQ APAPADHVRR
DFTATRPGEK LVGDIGTGRR P