Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0410 |
Symbol | |
ID | 5668834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 488900 |
End bp | 489325 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641239343 |
Product | integrase, catalytic region |
Protein accession | YP_001504782 |
Protein GI | 158312274 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.13708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACA AGTACGAACT GATCGCCGCG GAGAAGGACG ACTACCCGAC ATCCAAGATG TGCCAGTGGC TCGTCGTATC GACGTCCGGT TTCTACGACT GGCACCGACG ACCGGCATCG ACCCGGACCC GCCGGCACGC CACCCTCGAC ACCCAGGTCC GGGCGGTGTT CGCCGCCTCG CGCCAGACCT ACGGCGCCCG GCGGATCGCA GCCGCCCCGA CCGCCTCCGG CGTGCGCATC TCCGTCCGCC TCGCCCGACG GATCACGCGC CGTGCAGGGC TGAAAGCCTG CCAGCCCAGG GCCTACCGCC GCACCACCAT CCCCGGCCAG GCCCCGGCGC CCGCCGACCA CGTCCGCCGC GACTTCACCG CCACCCGCCC CGGCGAGAAG CTCGTCGGGG ACATCGGCAC CGGTCGCCGC CCCTGA
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Protein sequence | MTDKYELIAA EKDDYPTSKM CQWLVVSTSG FYDWHRRPAS TRTRRHATLD TQVRAVFAAS RQTYGARRIA AAPTASGVRI SVRLARRITR RAGLKACQPR AYRRTTIPGQ APAPADHVRR DFTATRPGEK LVGDIGTGRR P
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