Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0403 |
Symbol | |
ID | 5668827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 482037 |
End bp | 482705 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641239336 |
Product | hypothetical protein |
Protein accession | YP_001504775 |
Protein GI | 158312267 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.196567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTTCG GCCGCCATTC CCGGCTCAGT GACGTGATGG AGAGCCCGCA AGCTCGTGCC CTTCTCGAGC GGGCCCTGCC CAGGCTGGCG GCGGCCCAGG CTCTCGAACG CTTCCCCAAC CTGACCATCG GGGTCATCGT CTACAACTAT CCGAGTCTCA CGGAGGCCGA GGCGGCGGAC CTCTGGGCCG GACTCGCCGC GGTGGATACG CCCGCGACCA GCCCCGCCGA GATCCCGGTC GCTACGCCGC GGGACGACTA CGAGGGCGGC GAGGTCGCCG CGGGCTCCGC GCCGGCCACC TACCCGGGCG CCGTCAGCCG ATGGTCGACG TTCGAGCTGG AACTGGCCGG CCCCTCGCAC GGCAACCCGT TCACCGACGT GGAGCTCACC GCGCGGTTCA GCCGGGACGG CGTGGAGATC GTCTCCGGCG GCTTCTACGA CGGCGACGGC CGCTGGCTGA TCCGGCTACT GCCGGCGGAG ACCGGCCGGT GGCGGTTCGT CACCTCGTCG AACGCCCGCA GCCTGGACGG CGTCACCGGG CAGTTCGACG TCACCCCGGC GGCCGAGGGA GCCCACGGGC CGGTCCGGGC GGACGGCTTC CACTTCGCGC ACGCGGACGG CACCCGCCAC CTCCCGCTGG GCACCACCGC CTACGCCTGG ATCCTGTAG
|
Protein sequence | MSFGRHSRLS DVMESPQARA LLERALPRLA AAQALERFPN LTIGVIVYNY PSLTEAEAAD LWAGLAAVDT PATSPAEIPV ATPRDDYEGG EVAAGSAPAT YPGAVSRWST FELELAGPSH GNPFTDVELT ARFSRDGVEI VSGGFYDGDG RWLIRLLPAE TGRWRFVTSS NARSLDGVTG QFDVTPAAEG AHGPVRADGF HFAHADGTRH LPLGTTAYAW IL
|
| |