Gene Franean1_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0403 
Symbol 
ID5668827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp482037 
End bp482705 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content73% 
IMG OID641239336 
Producthypothetical protein 
Protein accessionYP_001504775 
Protein GI158312267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.196567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCG GCCGCCATTC CCGGCTCAGT GACGTGATGG AGAGCCCGCA AGCTCGTGCC 
CTTCTCGAGC GGGCCCTGCC CAGGCTGGCG GCGGCCCAGG CTCTCGAACG CTTCCCCAAC
CTGACCATCG GGGTCATCGT CTACAACTAT CCGAGTCTCA CGGAGGCCGA GGCGGCGGAC
CTCTGGGCCG GACTCGCCGC GGTGGATACG CCCGCGACCA GCCCCGCCGA GATCCCGGTC
GCTACGCCGC GGGACGACTA CGAGGGCGGC GAGGTCGCCG CGGGCTCCGC GCCGGCCACC
TACCCGGGCG CCGTCAGCCG ATGGTCGACG TTCGAGCTGG AACTGGCCGG CCCCTCGCAC
GGCAACCCGT TCACCGACGT GGAGCTCACC GCGCGGTTCA GCCGGGACGG CGTGGAGATC
GTCTCCGGCG GCTTCTACGA CGGCGACGGC CGCTGGCTGA TCCGGCTACT GCCGGCGGAG
ACCGGCCGGT GGCGGTTCGT CACCTCGTCG AACGCCCGCA GCCTGGACGG CGTCACCGGG
CAGTTCGACG TCACCCCGGC GGCCGAGGGA GCCCACGGGC CGGTCCGGGC GGACGGCTTC
CACTTCGCGC ACGCGGACGG CACCCGCCAC CTCCCGCTGG GCACCACCGC CTACGCCTGG
ATCCTGTAG
 
Protein sequence
MSFGRHSRLS DVMESPQARA LLERALPRLA AAQALERFPN LTIGVIVYNY PSLTEAEAAD 
LWAGLAAVDT PATSPAEIPV ATPRDDYEGG EVAAGSAPAT YPGAVSRWST FELELAGPSH
GNPFTDVELT ARFSRDGVEI VSGGFYDGDG RWLIRLLPAE TGRWRFVTSS NARSLDGVTG
QFDVTPAAEG AHGPVRADGF HFAHADGTRH LPLGTTAYAW IL