| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0388 |
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| Symbol | |
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| ID | 5668812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 464012 |
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| End bp | 465445 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641239320 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001504760 |
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| Protein GI | 158312252 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.423385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.332303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCTGT CCGAACTCGG ATTCGAGGGT CTGGACGAAT TCTCCGACGA GGTGTGGCGG
ACGGTGGCCC GCCACCCCTA CTGCGGGGTT GACCTGCTCG CGGAGTGGCT GCGCCGCCCC
GAGCCCATTG TCCAGGCCGA GATGGACCGG CTGGTGGAGG CGGGTCTCGT CCGCCGGGTC
GGCCACCAGT GGGAGCCGCA GGACCCGGTG CGCGTCCTGC AGGCACGCCA CGCCATGCGC
GAGGCGGCGC TGGTCGCCGA GCGGGCGCGG ATGGCCGACG AACGGGCGCA GCTCTACCGG
TCGGGCCTGT TCGGCGACTA CGTCGCCGGC CGCCGCCGGG CGGGGACCAA CGCGGGCGTG
CAGCTTCTCG CCCGCGACGA GATCTTCCCC CGGATGGCGG AGCTGACCCG CAGGTCGACC
CAGTCCGTCC GGTTCCTGCT GACCGGGCCG CCGCCGCCCG GCCTCGGTGG AGACGTCCCC
GACCTGCTGG TACCGGCCGC CAGCCGGGGC GTGCGCGTCG TCAGCGTGTG GACGGCGGGC
GCGGTCGCGG CGGCGCGCCG GCGGCACCAG GGGCGGCGGC TGCCGCCGAT CGGGCAGATC
CACGTGTTGC CGGCGCTGCC GATGCGGGCG ATCGTCTGGG ACGGCTCCGC CGCGCTCGTG
CCGGTGCGTG ACGACGACCT CGACGACGGC GCGTTCGCGG TCGTCGCCCC GACTCTGGTC
CGGGCGATCG CGGACATGGT GACCCGCACC CAGTACGCGG CGGCGCGGCG CGGGTCGGGT
GAGGTCGAGC TCGACGAGCC CGCGACGGTG CGCCGCCAGC GCGCCCTGCT CCAGCTGCTC
GACAGCGGGC TCGACGACAG CCGTGCGGCC CGGGAGCTCG GTGTCTCCGA CCGGACGGTG
AAACGGGACG TGGCGGAGAT GTGCCAACGC TTCGGCGTGC TGACCCGGTT CCAACTCGGT
GCCGCCGCCG CGCGCGCCGG ATACCTGCCC CGGGGCGCCG GCGCCGGCCG CTGGGACGGC
GGACCGGACG GTGGCCTCGA CGCCGCGTTC GACGGTGGCC TCGGCGGTGG TCTCGACGGC
GCGCTCGGCG GGGTTCTCGG TGGTGTCCGC GGCGGGGCGC TCGCGGCCGG CCGGGGCGGC
CGCGCGGCTG CCCTGCCAGC GGTTCCCGCT CCGGCGTCGC CCGAGTCGGA CCCCGCCGCG
GCGACCGCGT CCGCATCGTC TGCGTCGTCG TCGGCGGCGT CCGCGCAGGC GGCCGGATCC
TCCTCGTCGG TGCCCGCGGC CGCCTCCTCG GGGCCGGGCG CGGCCCGTCC GGTGGCACGA
CTTGGCCAGA CGGGTGCCGC CGGTGCCCGT CGAGGTGACC GCGCGGGCGA CCGGACGGGC
GATCGGGCGT CCGGCGGGCG CGGTAATGGC ATGAACAGGA CATGGCGTCC CTAA
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| Protein sequence | MRLSELGFEG LDEFSDEVWR TVARHPYCGV DLLAEWLRRP EPIVQAEMDR LVEAGLVRRV
GHQWEPQDPV RVLQARHAMR EAALVAERAR MADERAQLYR SGLFGDYVAG RRRAGTNAGV
QLLARDEIFP RMAELTRRST QSVRFLLTGP PPPGLGGDVP DLLVPAASRG VRVVSVWTAG
AVAAARRRHQ GRRLPPIGQI HVLPALPMRA IVWDGSAALV PVRDDDLDDG AFAVVAPTLV
RAIADMVTRT QYAAARRGSG EVELDEPATV RRQRALLQLL DSGLDDSRAA RELGVSDRTV
KRDVAEMCQR FGVLTRFQLG AAAARAGYLP RGAGAGRWDG GPDGGLDAAF DGGLGGGLDG
ALGGVLGGVR GGALAAGRGG RAAALPAVPA PASPESDPAA ATASASSASS SAASAQAAGS
SSSVPAAASS GPGAARPVAR LGQTGAAGAR RGDRAGDRTG DRASGGRGNG MNRTWRP
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