Gene Franean1_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0338 
Symbol 
ID5668762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp405763 
End bp406221 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content73% 
IMG OID641239269 
Producthypothetical protein 
Protein accessionYP_001504710 
Protein GI158312202 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0107675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC TCAAGGAGCG GCTGCGCGAG GATCTCACTG TCGCCATGCG AGCACGTGAC 
GACCTGCGCC TGTCGACGCT GCGCCTTGCC CTCGCCGCGG TGAAGGACGC GGAGGTCGCC
GGCACCGCCG CCCGGGAGCT CGACGACGCC GAGGTCGAGA AGATCCTGGC CCGGGAGGTC
CGCAAGCGCC GGGAGGCCGC GGAGGCGTTC GCCGCCGCCG GGCGGCCCGA GCAGTCCAGC
CGCGAGAACG CCGAGGGTGA CGTTCTCGCC GACTACCTGC CCAGCCAGCT CGGCGAGGAC
GAGCTGCGAG CGATCATCGA CGAGGTGATG GCCGAGCTCG GGCTCACCGG CATGAAGGCG
ATGGGCCAGG TGATGAAGGC CGCGCAGGCG CGCATCGCCG GCCGGGCGGA CGGGAAGCGG
GTGTCCGAGC TCGTCCGCGC GCGGCTGAGC GAGTCCTGA
 
Protein sequence
MSTLKERLRE DLTVAMRARD DLRLSTLRLA LAAVKDAEVA GTAARELDDA EVEKILAREV 
RKRREAAEAF AAAGRPEQSS RENAEGDVLA DYLPSQLGED ELRAIIDEVM AELGLTGMKA
MGQVMKAAQA RIAGRADGKR VSELVRARLS ES